| Protein: | CE13066 |
| Organism: | Caenorhabditis elegans |
| Length: | 763 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE13066.
| Description | E-value | Query Range |
Subject Range |
|
|
389.0 | [0..1] | [752..1] |
|
Region A: Residues: [1-374] |
1 11 21 31 41 51
| | | | | |
1 MLLSVSNGTD QNPQDLNDLQ WNAFHAFLLL LIILVVFGNT MVIFAVAVDR KLRSVTTNKF 60
61 IASLAVSDLL VGLIVMPLSL YYKMHNDHWT LGYTWCQFHL VSGVFSTTAS IVHLVAISLD 120
121 RYFAIMFPTE YQRHSVSTST VPYVVMIWLM ALAVSSTLFM EQRDSFDGIC WISNPQYIVL 180
181 SSFLSFFLPG AIVVYLYMKI FKKLRNHQLY MFGQLTHRGG ERERRHSLPR VIIEEVRSRR 240
241 GSRMSQTGSQ SGSPTRRQSG GSKERSPSQP DIHIVAKPQQ RWRSPTICAE TLAHDRLLAA 300
301 KKRVSIVPDP PSMDVSVNMA SIDQMKDEHH HNLMREEELL GCEAGRRKQS EEEVRKLSDE 360
361 RKRVIYERRR SSTS
|
| Detection Method: |  |
| Confidence: | 36.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [375-763] |
1 11 21 31 41 51
| | | | | |
1 ENPNGIPIMQ AFQKAYQEVR AGRRRSTIHD ITAYHFPSLT TVNEPATPPP GEDCEEKEKD 60
61 SDGTSIMHKL SSGSSIAETV IAMLPKTSTL SKTDSHESSV STEASQKPLL GPPTHHYTKK 120
121 SQTQKEPRYS PSIPAPTFLM VPAMMAVNTP PATPNTKEAP TNCTSLLQVP RLFDCPSPCS 180
181 VPSNSSHSSY TSASGSSDTY RRISMNSYGS SLTDGTESTF ECDSRRSSAW STIRAAVFDR 240
241 QQMRGGKASV DITVDRTGSP QKKMSTISRG KLRRIATQVT RAIRRKRRES MAIRRESRAT 300
301 RVVAAILIAF LICWIPYFCI SIFRGVLMGF QININTPIHL TLFVYTSWLG YAHSCFNPLI 360
361 YMCLNKNFRN TMRKMMQKTN RAKMAEQEG
|
| Detection Method: | |
| Confidence: | 2.12 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
