Protein Overview: CE12894

General Information:
Name(s) found:	CE12894 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00020139 Alanine--glyoxylate aminotransferase 2-like status:Confirmed UniProt:P91408 protein_id:CCD65920.1 [WormBase] pir\|\|T25848 hypothetical protein T01B11.2 - Caenorhabditis elegans [NCBI NR] gi\|71992977\|ref\|NP_001023346.1\| hypothetical protein T01B11.2 [Caenorhabditis elegans] [NCBI NR] gi\|6137259\|sp\|P91408.1\|AGT2L_CAEEL RecName: Full=Alanine--glyoxylate aminotransferase 2-like [NCBI NR] ref\|NP_501438.1\| aminotransferase (51.6 kD) (4J214) [Caenorhabditis elegans] [NCBI NR] gi\|1707274\|gb\|AAB37999.1\| Hypothetical protein T01B11.2a [Caenorhabditis elegans] [NCBI NR] Probable aminotransferase T01B11.2 (EC 2.6.1.-) - Caenorhabditis elegans [Swiss-Prot] Alanine--glyoxylate aminotransferase 2-like OS=Caenorhabditis elegans GN=T01B11.2 PE=3 SV=1 [Swiss-Prot] [wormpep67.fasta] CE12894 WBGene00020139 aminotransferase status:Confirmed SW:P91408 protein_id:AAB37999.1 [wormpep150.fasta] 12894 WBGene00020139 aminotransferase status:Confirmed SW:P91408 protein_id:AAB37999.1 [wormpep130-phg-ecoli-orf-rand.fasta] aminotransferase (51.6 kD) (4J214) [Caenorhabditis elegans]gi\|1707274\|gb\|AAB37999.1\| Hypothetical protein T01B11.2a [Caenorhabditis elegans]gi\|6137259\|sp\|P91408\|YO1J_CAEEL Probable aminotransferase T01B11.2gi\|7506813\|pir\|\|T25848 hypothetical protein T0 [nrdb_11152004_Chlamydomonas] aminotransferase status:Confirmed SW:P91408 protein_id:AAB37999.1 [wormpep115.fasta.reversed] CE12894 aminotransferase status:Partially_confirmed SW:P91408 protein_id:AAB37999.1 [wormpep80.hongbin] CE12894 WBGene00020139 aminotransferase status:Confirmed UniProt:P91408 protein_id:AAB37999.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE12894 WBGene00020139 aminotransferase status:Confirmed UniProt:P91408 protein_id:AAB37999.1\| [wormORF-contam.fasta] Hypothetical protein T01B11.2a [Caenorhabditis elegans] [nr-271106-contam.fasta] Probable aminotransferase T01B11.2 [nr-271106-contam.fasta] T01B11.2a [Caenorhabditis elegans] [nr-271106-contam.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE12894 WBGene00020139 aminotransferase status:Confirmed UniProt:P91408 protein_id:CCD65920.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] CE12894 WBGene00020139 status:Confirmed UniProt:P91408 protein_id:CCD65920.1 Alanine--glyoxylate aminotransferase 2-like [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	467 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	arginine metabolic process [IEA] ectoine biosynthetic process [IEA] embryonic development ending in birth or egg hatching [IMP] tetrapyrrole biosynthetic process [IEA] biosynthetic process [IEA] biotin biosynthetic process [IEA] gamma-aminobutyric acid metabolic process [IEA]
Molecular Function:	pyridoxal phosphate binding [IEA] 4-aminobutyrate transaminase activity [IEA] transaminase activity [IEA] glutamate-1-semialdehyde 2,1-aminomutase activity [IEA] diaminobutyrate-pyruvate transaminase activity [IEA] adenosylmethionine-8-amino-7-oxononanoate transaminase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTLVNALGF FTSSTPAAAA TKDVRSKEEI LKRRKDTIGS KCQIFYSDDP FMVSRASMQY  60
   61 LYDEKSNKFL DCISNVQHVG HCHPKVVEAI SKQLATSTCN VRFVSTQLTD CAEQILSTLP 120
  121 GLDTVLFCNS GSEANDLALR LARDYTKHKD AIVIEHAYHG HVTTTMELSP YKFDHGSTVS 180
  181 QPDWVHVAPC PDVFRGKHRL ADNELTNEDK LYAAGKQYSD DVKSILNDVE SRQCGVAAYF 240
  241 AEALQSCGGQ VIPPKDYFKD VATHVRNHGG LMIIDEVQTG FGRIGRKYWA HQLYDDGFLP 300
  301 DIVTMGKPMG NGFPVSAVAT RKEIADALGG EVGYFNTYGG NPVACAAVIS VMKVVKDENL 360
  361 LEHSQQMGEK LEVALRDLQK KHECIGDIRG VGLFWGIDLV KDRNTREPDQ KLAIATILAL 420
  421 RKSYGILLNA DGPHTNILKI KPPLCFNENN ILETVTALDQ VLTLMNR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
4-aminobutyrate transaminase activity	9.08769857759091	bayes_pls_golite062009
succinate-semialdehyde dehydrogenase binding	8.44659094913875	bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity	3.359406422625	bayes_pls_golite062009
transferase activity	2.59075614411581	bayes_pls_golite062009
catalytic activity	2.29878871754893	bayes_pls_golite062009
5-aminolevulinate synthase activity	1.85905571238884	bayes_pls_golite062009
adenosylmethionine-8-amino-7-oxononanoate transaminase activity	1.74778109525713	bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor	1.46601963907552	bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity	1.46601963907552	bayes_pls_golite062009
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity	1.4383564662931	bayes_pls_golite062009
glutamate decarboxylase activity	1.34215658716536	bayes_pls_golite062009
transferase activity, transferring nitrogenous groups	1.28316822767388	bayes_pls_golite062009
transaminase activity	1.24990480711889	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.19150094103499	bayes_pls_golite062009
transcription regulator activity	0.977210827616757	bayes_pls_golite062009
nucleic acid binding	0.892872530648552	bayes_pls_golite062009
binding	0.892049641082766	bayes_pls_golite062009
ligase activity	0.827063849687833	bayes_pls_golite062009
DNA binding	0.803965264969424	bayes_pls_golite062009
kynureninase activity	0.777830972119923	bayes_pls_golite062009
carbon-sulfur lyase activity	0.698312655247044	bayes_pls_golite062009
intramolecular transferase activity, transferring amino groups	0.659071155545801	bayes_pls_golite062009
transcription factor activity	0.597417107954964	bayes_pls_golite062009
N-succinyltransferase activity	0.52897097514616	bayes_pls_golite062009
ornithine-oxo-acid transaminase activity	0.311107335626334	bayes_pls_golite062009
N-acyltransferase activity	0.2609065149092	bayes_pls_golite062009
pyridoxal phosphate binding	0.16957228630576	bayes_pls_golite062009
vitamin B6 binding	0.16957228630576	bayes_pls_golite062009
cystathionine beta-lyase activity	0.15938456446406	bayes_pls_golite062009
hydrolase activity	0.158765164178244	bayes_pls_golite062009
amine binding	0.14702601411039	bayes_pls_golite062009
methyltransferase activity	0.103986924428507	bayes_pls_golite062009
sulfurtransferase activity	0.0450490929307473	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	0.0254276656964899	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..467]	PSI-BLAST	97.09691	The structure of gamma-aminobutyrate aminotransferase mutant: E211S

Protein Overview: CE12894

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: