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Protein Overview: exos-3

General Information:
Name(s) found: exos-3 / CE11462 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00010325 locus:exos-3 status:Confirmed UniProt:Q93830 protein_id:CAB01875.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 226 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVYLPGDVI NEPSSSDSSI IGYGISVRGQ TRIATQPGAF HNDDGKVWLN VHSKRYIPQE  60
   61 GDRVIAIVTS KTGDFFRLDI GTAEYAMINF TNFEGATKRN RPNLKTGDII YATVFDTTPR 120
  121 TEAELTCVDD EKRARGMGQL NGGFMFKVSL NHCRRLINPS CKILQTVGKF FKFEITVGMN 180
  181 GRIWISASTS DDIIKIHDII NKSEFITDED ELITLVQNNY TRSVSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] PSI-BLAST 53.154902 No description for 2nn6G was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.68323473451419 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.850020261215126 bayes_pls_golite062009
  • protein binding
    		•  0.469863842628997 bayes_pls_golite062009
  • RNA binding
    		•  0.0954653278078664 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle