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Protein Overview: letm-1

General Information:
Name(s) found: letm-1 / CE11400 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00010279 locus:letm-1 status:Confirmed UniProt:Q9XVM0 protein_id:CAB03150.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 784 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLRYASNAY HIGRYAQRLF ATGQRNRVFH QYIASTSLQT TSLRYASTDR SKVEYTLKML  60
   61 REDVQKQDEE AQKVLSLMKS DKDVATVKPP LKDRIIHELK HYYHGFRLLA LETRVSAKYL 120
  121 WTVLRGATLS RRERQQLVRT VSDLFRLVPF SFFIIVPFME LALPIFIKLF PGMLPSTFQE 180
  181 SSKEEEKWRK QVKLRVEMAK FLQDTIEEIG LERKTRNKES TRSLEFALFI KKVRNEGGYV 240
  241 SNEELLKFSK LFEDEITLDN LSMGQLRSLC RLMSINSLGS PEILRFQLNM KIRELKADDK 300
  301 QIAAEGGVDA LSSIDLQSAC RARGMRAIGV SEERLKEQLV QWLELSLNDK VPPALLLLSR 360
  361 TLYLPEEVSF PDRLKAIVQN LPDGLAETTK QKLTEMEGGQ IDHKARIELI RSIESAIANE 420
  421 KKDEEKKKKA AEEALKSKEE AEKAKVQEKE KLVDVAAQAI VHELKKDIYD AVASTSSTTE 480
  481 AKEPAAKPSE AKEEKKEDIT VDKKDLSHIE EIIVGGPIKE AKHDILGLRE KVLEHKEDLM 540
  541 EINSLDGAFA ETKIAKRLRH KLNSMIEDVD SMVDKLEDEK RNIREMLIDP TVENSVDLKK 600
  601 EREVRIQDVI DSLAKLKESK GEQADDGEQR ERIEALLKTI DEDSDGIVDK QLVLEVIELL 660
  661 EKHTDVHVSA AQMASMIGTL KKEDEVAGLT EEIRKVQSGN YQMPILPTGP SSADAFNQPQ 720
  721 GVYTASKQVP ARSEQEGVEQ KQQVENGPVG IPDVDTKVTS TLQQNSSKTS SSSTTKSTSD 780
  781 SKSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] MSA 1.313951 View MSA. No confident structure predictions are available.
    2 View Details [179..279] deduced N/A No confident structure predictions are available.
    3 View Details [280..665] PSI-BLAST 15.221849 Heavy meromyosin subfragment
    4 View Details [666..784] PSI-BLAST 3.69897 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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