YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: sun-1

General Information:
Name(s) found: sun-1 / CE11288 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00006311 locus:sun-1 Sun domain-containing protein 1 status:Partially_confirmed UniProt:Q20924 protein_id:CAB01511.1 [WormBase]
  • pir||T22830 hypothetical protein F57B1.2 - Caenorhabditis elegans [NCBI NR]
  • gi|41688735|sp|Q20924.1|SUN1_CAEEL RecName: Full=Sun domain-containing protein 1 [NCBI NR]
  • gi|3877753|emb|CAB01511.1| C. elegans protein F57B1.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17561540|ref|NP_506281.1| SUN (S. pombe sad1/Ce-UNC-84) domain protein family member (sun-1) [Caenorhabditis elegans] [NCBI NR]
  • Sun domain-containing protein 1 OS=Caenorhabditis elegans GN=sun-1 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE11288 WBGene00006311 locus:sun-1 status:Partially_confirmed SW:Q20924 protein_id:CAB01511.1 [wormpep150.fasta]
  • 11288 WBGene00006311 locus:sun-1 status:Partially_confirmed SW:Q20924 protein_id:CAB01511.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative mitochondrial protein, with a coiled coil domain (54.1 kD) (5N672) [Caenorhabditis elegans]gi|3877753|emb|CAB01511.1| Hypothetical protein F57B1.2 [Caenorhabditis elegans]gi|7504493|pir||T22830 hypothetical protein F57B1.2 - Caenorhabditis eleg [nrdb_11152004_Chlamydomonas]
  • locus:sun-1 status:Partially_confirmed TR:Q20924 protein_id:CAB01511.1 [wormpep115.fasta.reversed]
  • CE11288 status:Partially_confirmed TR:Q20924 protein_id:CAB01511.1 [wormpep80.hongbin]
  • CE11288 WBGene00006311 locus:sun-1 status:Partially_confirmed UniProt:SUN1_CAEEL protein_id:CAB01511.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE11288 WBGene00006311 locus:sun-1 status:Partially_confirmed UniProt:SUN1_CAEEL protein_id:CAB01511.1| [wormORF-contam.fasta]
  • Hypothetical protein F57B1.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • SUN (S. pombe sad1/Ce-UNC-84) domain protein family member (sun-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Sun domain protein 1 [nr-271106-contam.fasta]
  • CE11288 WBGene00006311 locus:sun-1 status:Partially_confirmed UniProt:Q20924 protein_id:CAB01511.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE11288 WBGene00006311 locus:sun-1 status:Partially_confirmed UniProt:Q20924 protein_id:CAB01511.1 Sun domain-containing protein 1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 473 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: centrosome localization [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    protein localization [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRHTISPQ FSNRHSPPVT RSVSRTGVHQ PLDTSTPVTR RDSQPGTITG TIQRFHESAD  60
   61 DSEIDLNSSK FIYKEHFSYK EITSMKKEMW YDWLEYRIRM VRRRFVPTWA QFKRTLMAVV 120
  121 LFAMLYKYAR DCLFDGTHHN SEGSYADKDA NWASEKQKFH QTISNLRAEF SAHDKQLDFK 180
  181 TDHLEKLLEN VLEHSKGWKE SAIEELKQIK LWQAEISDAL QQMKKEIDDA KSTKIIHSTP 240
  241 EKAPETAPTA SLPPSSQLQP MHITRRALLG VNVANSLIGA SIDHSCSSRP VSAKDGFFYD 300
  301 FMSYFGTFQE GYALLDRDVL SPGEAWCTYD KRATLTVKLA RFVIPKSVSY QHVRWSGIVP 360
  361 NHAPKLYDVV ACTDSCCTKW QPLVANCEYK ERDGSYDEQE QFCSVPTIQN HSPINHVQFR 420
  421 FRENHGDMPK TCAYLIRVYG EPVDPPKETQ PMTDNGTESK LESAIVNSVS ETA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..288] PSI-BLAST 15.045757 Heavy meromyosin subfragment
    2 View Details [289..473] FFAS03 1.98 X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.947074796716417 bayes_pls_golite062009
  • protein binding
    		•  0.102037008381724 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle