| Protein: | sun-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 473 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sun-1.
| Description | E-value | Query Range |
Subject Range |
|
|
343.0 | [0..1] | [473..1] |
|
Region A: Residues: [1-288] |
1 11 21 31 41 51
| | | | | |
1 MALRHTISPQ FSNRHSPPVT RSVSRTGVHQ PLDTSTPVTR RDSQPGTITG TIQRFHESAD 60
61 DSEIDLNSSK FIYKEHFSYK EITSMKKEMW YDWLEYRIRM VRRRFVPTWA QFKRTLMAVV 120
121 LFAMLYKYAR DCLFDGTHHN SEGSYADKDA NWASEKQKFH QTISNLRAEF SAHDKQLDFK 180
181 TDHLEKLLEN VLEHSKGWKE SAIEELKQIK LWQAEISDAL QQMKKEIDDA KSTKIIHSTP 240
241 EKAPETAPTA SLPPSSQLQP MHITRRALLG VNVANSLIGA SIDHSCSS
|
| Detection Method: |  |
| Confidence: | 15.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [289-473] |
1 11 21 31 41 51
| | | | | |
1 RPVSAKDGFF YDFMSYFGTF QEGYALLDRD VLSPGEAWCT YDKRATLTVK LARFVIPKSV 60
61 SYQHVRWSGI VPNHAPKLYD VVACTDSCCT KWQPLVANCE YKERDGSYDE QEQFCSVPTI 120
121 QNHSPINHVQ FRFRENHGDM PKTCAYLIRV YGEPVDPPKE TQPMTDNGTE SKLESAIVNS 180
181 VSETA
|
| Detection Method: | |
| Confidence: | 1.98 |
| Match: | 1tvgA |
| Description: | X-ray structure of human PP25 gene product, HSPC034. Northeast Structural Genomics Target HR1958. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.947074796716417 | bayes_pls_golite062009 |
| protein binding | 0.102037008381724 | bayes_pls_golite062009 |
