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Protein Overview: lem-3

General Information:
Name(s) found: lem-3 / CE10332 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00002276 locus:lem-3 ankyrin domain status:Partially_confirmed UniProt:P90874 protein_id:CAB05722.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 732 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IEALink to PubMed article]
    Biological Process: axonal fasciculation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPNGAITTT PRSRMPPTTP SSGKSRPKKE TLHYLAASSS TTSVDAARTL LERGANVNAI  60
   61 DRDGATPLHY ACTHDNVAMA QLLLTFGADP MSADKLGRTA YSIAKGNTLR FLRRYKKSSN 120
  121 RQRLGFFRRF FACHSRNETF FIVRNNQEVA PLRPTALAEA ASISFNRGNV LTNSYRCAKK 180
  181 KIRATFHAIR RSRSNSTATL QDVVLTSEGI RTVTTPSRRA PKATVYAKRS MSVSDLLLIP 240
  241 DRRDIKNEDV KTRGSPVKKT RGTGRSRTPE AILNPRKQRT PVNHHKRSKS QETKLVAMPS 300
  301 PNSMAYYNTS RARNAGLRPA PSAPPLSPEP AIAAVKTPKT PTTPKTSKGR SKSPANTTAY 360
  361 FTADESLELL GNNMEKLNIE SKSAKSSKLK TPSKPTTSSS TSFSSAEDDK EAEVSTPTTV 420
  421 DDGEIRKIRR LREGELKSEL KKFGISPAGP LDARTRRLYE KKLLIERRKI TNRGYSPDAD 480
  481 VVSCMNIRLS RFVLAKPFSR KSSIFKNQIL VKRNSPQLEL VLRNGFLPAD FASRARKCDE 540
  541 NVRSEFSGNG FGYNAFCYLI MDPRILGSNV ENLTLETFVR SIFYVGKGSK NRPLAHFIDA 600
  601 RNERRDKLDK LKTCEKLKTI DELWTLGFGI PRHEISHGVS DEEAFVREAS IIEAVKLKNL 660
  661 RNKKAGEFHG TTKSWDNITK SEYGTFLLDR ALSTLKLEGI RLITEDNLPD SLYPYVNNRR 720
  721 GAGGGRTPKT PK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..442] PSI-BLAST 78.0 Ankyrin-R
    2 View Details [443..553] deduced N/A No confident structure predictions are available.
    3 View Details [554..732] MSA 2.07497 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle