| Protein: | lem-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 732 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lem-3.
| Description | E-value | Query Range |
Subject Range |
|
|
470.0 | [0..1] | [617..199] |
|
Region A: Residues: [1-442] |
1 11 21 31 41 51
| | | | | |
1 MPPNGAITTT PRSRMPPTTP SSGKSRPKKE TLHYLAASSS TTSVDAARTL LERGANVNAI 60
61 DRDGATPLHY ACTHDNVAMA QLLLTFGADP MSADKLGRTA YSIAKGNTLR FLRRYKKSSN 120
121 RQRLGFFRRF FACHSRNETF FIVRNNQEVA PLRPTALAEA ASISFNRGNV LTNSYRCAKK 180
181 KIRATFHAIR RSRSNSTATL QDVVLTSEGI RTVTTPSRRA PKATVYAKRS MSVSDLLLIP 240
241 DRRDIKNEDV KTRGSPVKKT RGTGRSRTPE AILNPRKQRT PVNHHKRSKS QETKLVAMPS 300
301 PNSMAYYNTS RARNAGLRPA PSAPPLSPEP AIAAVKTPKT PTTPKTSKGR SKSPANTTAY 360
361 FTADESLELL GNNMEKLNIE SKSAKSSKLK TPSKPTTSSS TSFSSAEDDK EAEVSTPTTV 420
421 DDGEIRKIRR LREGELKSEL KK
|
| Detection Method: |  |
| Confidence: | 78.0 |
| Match: | 1n11A |
| Description: | Ankyrin-R |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [443-553] |
1 11 21 31 41 51
| | | | | |
1 FGISPAGPLD ARTRRLYEKK LLIERRKITN RGYSPDADVV SCMNIRLSRF VLAKPFSRKS 60
61 SIFKNQILVK RNSPQLELVL RNGFLPADFA SRARKCDENV RSEFSGNGFG Y
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [554-732] |
1 11 21 31 41 51
| | | | | |
1 NAFCYLIMDP RILGSNVENL TLETFVRSIF YVGKGSKNRP LAHFIDARNE RRDKLDKLKT 60
61 CEKLKTIDEL WTLGFGIPRH EISHGVSDEE AFVREASIIE AVKLKNLRNK KAGEFHGTTK 120
121 SWDNITKSEY GTFLLDRALS TLKLEGIRLI TEDNLPDSLY PYVNNRRGAG GGRTPKTPK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
