YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE10120

General Information:
Name(s) found: CE10120 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00018210 status:Confirmed UniProt:O16271 protein_id:CCD65244.1 [WormBase]
  • pir||T03905 hypothetical protein F39G3.5 - Caenorhabditis elegans [NCBI NR]
  • gi|71993477|ref|NP_001023900.1| hypothetical protein F39G3.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|2291208|gb|AAB65330.1| Hypothetical protein F39G3.5a [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_504269.1| cytochrome 561 (28.1 kD) (5F201) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE10120 WBGene00018210 status:Confirmed TR:O16271 protein_id:AAB65330.1 [wormpep150.fasta]
  • 10120 WBGene00018210 status:Confirmed TR:O16271 protein_id:AAB65330.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cytochrome 561 (28.1 kD) (5F201) [Caenorhabditis elegans]gi|2291208|gb|AAB65330.1| Hypothetical protein F39G3.5a [Caenorhabditis elegans]gi|7503009|pir||T03905 hypothetical protein F39G3.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:O16271 protein_id:AAB65330.1 [wormpep115.fasta.reversed]
  • CE10120 status:Predicted TR:O16271 protein_id:AAB65330.1 [wormpep80.hongbin]
  • CE10120 WBGene00018210 status:Confirmed UniProt:O16271_CAEEL protein_id:AAB65330.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE10120 WBGene00018210 status:Confirmed UniProt:O16271_CAEEL protein_id:AAB65330.1| [wormORF-contam.fasta]
  • Hypothetical protein F39G3.5a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F39G3.5a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE10120 WBGene00018210 status:Confirmed UniProt:O16271 protein_id:AAB65330.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE10120 WBGene00018210 status:Confirmed UniProt:O16271 protein_id:CCD65244.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F39G3.5 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 251 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: electron transport [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSDSRLGNA RSFNRFDIIL SITHFVGFIT ICLNGYFLNT FKNGLAWPSK VKNGDNKALG  60
   61 KRGDQLHAFL MILAFIYFQG EALLAYRLYR YDAKIISKLL HTALHIIAIG LGITALTVII 120
  121 MSTNNAGWNN FTSVHSWIGI CLLSVYLVQF SFGFLTYLCP CSPGKYRARL MPIHRAVGVG 180
  181 CFIVACVQCC LGYGNILLED QPGCFSDLSC KNRIEYVGAF SVMFIILYTL LVLALIIPVP 240
  241 WRREKTPDEL K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] MSA 2.188996 View MSA. No confident structure predictions are available.
    2 View Details [91..251] FFAS03 1.42 Formate dehydrogenase N, cytochrome (gamma) subunit

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ion transmembrane transporter activity
    		•  0.89088306929437 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.890158298449879 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.814112055419571 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.812206012699042 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.773137851186839 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.762114046778875 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.679179334119734 bayes_pls_golite062009
  • transporter activity
    		•  0.629864849462794 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.622501423809131 bayes_pls_golite062009
  • catalytic activity
    		•  0.349353660965659 bayes_pls_golite062009
  • ubiquinol-cytochrome-c reductase activity
    		•  0.143276144501499 bayes_pls_golite062009
  • oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor
    		•  0.143276144501499 bayes_pls_golite062009
  • binding
    		•  0.0102629993652836 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle