| Protein: | CE10120 |
| Organism: | Caenorhabditis elegans |
| Length: | 251 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10120.
| Description | E-value | Query Range |
Subject Range |
|
|
264.0 | [0..6] | [249..277] |
|
|
228.0 | [0..1] | [251..1] |
|
|
227.0 | [0..3] | [249..1] |
|
|
226.0 | [0..6] | [249..2] |
|
|
225.0 | [0..1] | [249..20] |
|
|
223.0 | [0..3] | [249..1] |
|
|
221.0 | [0..9] | [249..6] |
|
|
220.0 | [0..9] | [249..6] |
|
|
219.0 | [0..9] | [249..6] |
|
Region A: Residues: [1-90] |
1 11 21 31 41 51
| | | | | |
1 MSSDSRLGNA RSFNRFDIIL SITHFVGFIT ICLNGYFLNT FKNGLAWPSK VKNGDNKALG 60
61 KRGDQLHAFL MILAFIYFQG EALLAYRLYR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [91-251] |
1 11 21 31 41 51
| | | | | |
1 YDAKIISKLL HTALHIIAIG LGITALTVII MSTNNAGWNN FTSVHSWIGI CLLSVYLVQF 60
61 SFGFLTYLCP CSPGKYRARL MPIHRAVGVG CFIVACVQCC LGYGNILLED QPGCFSDLSC 120
121 KNRIEYVGAF SVMFIILYTL LVLALIIPVP WRREKTPDEL K
|
| Detection Method: | |
| Confidence: | 1.42 |
| Match: | 1kqfC |
| Description: | Formate dehydrogenase N, cytochrome (gamma) subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ion transmembrane transporter activity | 0.89088306929437 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.890158298449879 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.814112055419571 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.812206012699042 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.773137851186839 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.762114046778875 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.679179334119734 | bayes_pls_golite062009 |
| transporter activity | 0.629864849462794 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.622501423809131 | bayes_pls_golite062009 |
| catalytic activity | 0.349353660965659 | bayes_pls_golite062009 |
| ubiquinol-cytochrome-c reductase activity | 0.143276144501499 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor | 0.143276144501499 | bayes_pls_golite062009 |
| binding | 0.0102629993652836 | bayes_pls_golite062009 |
