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Protein Overview: CE09810

General Information:
Name(s) found: CE09810 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00009266 status:Confirmed UniProt:Q93638 protein_id:CAB03017.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRLKSNAR KSAVNKLVKK TDNRIKEEQR VIRTPKVDEQ ELKLVRAPKI SSAMFMKYNT  60
   61 QLGPPFHVIV DTNFVNFAVK NRIDMFQGFM DCLFAKTIVY ATDCVLAELE KVRRFKIALK 120
  121 VLKDPRVQRL KCEHKGTYAD DCLVQRVTQH KCYIVATCDR DLKRRIRKIP GVPIMYIVNH 180
  181 RFSIERMPDA YGAPMN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] PSI-BLAST 14.69897 Hypothetical protein AF0591

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • DNA binding
    		•  3.09371833630908 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.04560439515264 bayes_pls_golite062009
  • nuclease activity
    		•  2.9643999717473 bayes_pls_golite062009
  • exonuclease activity
    		•  2.73966722455965 bayes_pls_golite062009
  • endodeoxyribonuclease activity
    		•  2.32240591300465 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  2.20319910135606 bayes_pls_golite062009
  • binding
    		•  2.06833406478856 bayes_pls_golite062009
  • flap endonuclease activity
    		•  1.93047867791632 bayes_pls_golite062009
  • endonuclease activity
    		•  1.76157945742159 bayes_pls_golite062009
  • 5'-3' exonuclease activity
    		•  1.66809858159343 bayes_pls_golite062009
  • protein binding
    		•  1.53930087292625 bayes_pls_golite062009
  • endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  1.5104333947608 bayes_pls_golite062009
  • catalytic activity
    		•  1.37534898662234 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  1.24621366977274 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.0761952249864 bayes_pls_golite062009
  • exodeoxyribonuclease activity, producing 5'-phosphomonoesters
    		•  0.756864776606945 bayes_pls_golite062009
  • exodeoxyribonuclease activity
    		•  0.74826759322705 bayes_pls_golite062009
  • 3'-5' exonuclease activity
    		•  0.50487165366129 bayes_pls_golite062009
  • 5'-3' exodeoxyribonuclease activity
    		•  0.34527101309477 bayes_pls_golite062009
  • double-stranded DNA specific exodeoxyribonuclease activity
    		•  0.123105804280941 bayes_pls_golite062009
  • single-stranded DNA specific exodeoxyribonuclease activity
    		•  0.120278857913627 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle