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Protein Overview: CE09732

General Information:
Name(s) found: CE09732 [WormBase]
Description(s) found:
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  • WBGene00017867 locus:slc-28.1 status:Confirmed UniProt:G5EE77 protein_id:CCD62498.1 [WormBase]
  • gi|8886418|gb|AAF80461.1|AF162673_1 CNT-like nucleoside transporter [Caenorhabditis elegans] [NCBI NR]
  • pir||T31692 hypothetical protein F27E11.1 - Caenorhabditis elegans [NCBI NR]
  • gi|2291114|gb|AAB65255.1| Hypothetical protein F27E11.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17560276|ref|NP_503967.1| hypothetical protein F27E11.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09732 WBGene00017867 nucleoside transporter status:Confirmed TR:O16192 protein_id:AAB65255.1 [wormpep150.fasta]
  • 09732 WBGene00017867 nucleoside transporter status:Confirmed TR:O16192 protein_id:AAB65255.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CNT-like nucleoside transporter (62.5 kD) (5D943) [Caenorhabditis elegans]gi|2291114|gb|AAB65255.1| Hypothetical protein F27E11.1 [Caenorhabditis elegans]gi|7500011|pir||T31692 hypothetical protein F27E11.1 - Caenorhabditis elegansgi|8886418|gb|AAF8046 [nrdb_11152004_Chlamydomonas]
  • nucleoside transporter status:Confirmed TR:O16192 protein_id:AAB65255.1 [wormpep115.fasta.reversed]
  • CE09732 nucleoside transporter status:Confirmed TR:O16192 protein_id:AAB65255.1 [wormpep80.hongbin]
  • CE09732 WBGene00017867 nucleoside transporter status:Confirmed UniProt:O16192_CAEEL protein_id:AAB65255.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09732 WBGene00017867 nucleoside transporter status:Confirmed UniProt:O16192_CAEEL protein_id:AAB65255.1| [wormORF-contam.fasta]
  • F27E11.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F27E11.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CNT-like nucleoside transporter [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09732 WBGene00017867 nucleoside transporter status:Confirmed UniProt:O16192 protein_id:AAB65255.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09732 WBGene00017867 nucleoside transporter status:Confirmed UniProt:G5EE77 protein_id:CCD62498.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE09732 WBGene00017867 locus:slc-28.1 status:Confirmed UniProt:G5EE77 protein_id:CCD62498.1 [wormpep246-ecoli-contam.fasta]
  • CE09732 WBGene00017867 locus:slc-28.1 status:Confirmed UniProt:G5EE77 protein_id:CCD62498.1 Sodium\/nucleoside cotransporter [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Sodium/nucleoside cotransporter OS=Caenorhabditis elegans GN=slc-28.1 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 568 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: nucleoside:sodium symporter activity [IEALink to PubMed article]
    nucleoside binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLNKKVHQN KEKNLISVTK SSLEHNANFY QRIYQKICPF IGPAAIVAFL LVYHGYLIAA  60
   61 GIHNYQKASP LIYVTLFFWL CFVINFIVGT KNFKVVYADF AGKLNDFAKR RAFVPITFKL 120
  121 AFAGALFAYT IVESLSEPTR LTGFGGYVFF VIFMVVFSNR PRKINWNIVT SALIFHYCLA 180
  181 LIVLKWPTGR WFFDQLSQLI IGLLEYAQVG AKFVFGFIAG PPNICDLAPV FIFTSLQTLI 240
  241 YFSAVVALLF YFGIIQIALK KSTWFMKVLI GTTPVESVYS WACTFLGQTE APLVIKPYLE 300
  301 KLTDSELFAV LTSGFSCTGG TVFAAYVALG ACPESILTAS ILSAPMSLAC SKLMYPEEQE 360
  361 TIIKEEDFEL DHENEKGFFD TLCSAGVALV PTVFAIGATL VVVMSLLALL DQIFFYIGDL 420
  421 IGYDGWSFQM LFGYAFFPLA YIMGITNNSN QTLLVAQLMG SKTAVNEFVA YDKLGQLQKE 480
  481 GKLDPKSVLV ATYALCGFSN FGSMGIQMEV IGGLAPGRKT VASKVMLRAL CAGAIACFMN 540
  541 ATVAGILISD PVVCNSANSN STCFRIPS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..136] MSA 1.034986 View MSA. No confident structure predictions are available.
    2 View Details [137..222] Pfam 33.309804 No description for PF01773.11 was found. No confident structure predictions are available.
    3 View Details [223..358] Pfam 11.346787 No description for PF07670.5 was found. No confident structure predictions are available.
    4 View Details [359..568] MSA 3.12297 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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