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View Structure Prediction Details

Protein: CE09732
Organism: Caenorhabditis elegans
Length: 568 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE09732.

Description E-value Query
Range
Subject
Range
gi|50752715 - gi|50752715|ref|XP_413724.1| PREDICTED: similar to Na+-dependent purine-selective nucleoside transpo...
623.0 [0..27] [566..674]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLNKKVHQN KEKNLISVTK SSLEHNANFY QRIYQKICPF IGPAAIVAFL LVYHGYLIAA  60
   61 GIHNYQKASP LIYVTLFFWL CFVINFIVGT KNFKVVYADF AGKLNDFAKR RAFVPITFKL 120
  121 AFAGALFAYT IVESLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [137-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPTRLTGFGG YVFFVIFMVV FSNRPRKINW NIVTSALIFH YCLALIVLKW PTGRWFFDQL  60
   61 SQLIIGLLEY AQVGAKFVFG FIAGPP

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 33.309804
Match: PF01773.11
Description: No description for PF01773.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [223-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NICDLAPVFI FTSLQTLIYF SAVVALLFYF GIIQIALKKS TWFMKVLIGT TPVESVYSWA  60
   61 CTFLGQTEAP LVIKPYLEKL TDSELFAVLT SGFSCTGGTV FAAYVALGAC PESILTASIL 120
  121 SAPMSLACSK LMYPEE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.346787
Match: PF07670.5
Description: No description for PF07670.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [359-568]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QETIIKEEDF ELDHENEKGF FDTLCSAGVA LVPTVFAIGA TLVVVMSLLA LLDQIFFYIG  60
   61 DLIGYDGWSF QMLFGYAFFP LAYIMGITNN SNQTLLVAQL MGSKTAVNEF VAYDKLGQLQ 120
  121 KEGKLDPKSV LVATYALCGF SNFGSMGIQM EVIGGLAPGR KTVASKVMLR ALCAGAIACF 180
  181 MNATVAGILI SDPVVCNSAN SNSTCFRIPS 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle