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Protein Overview: CE09524

General Information:
Name(s) found: CE09524 [WormBase]
Description(s) found:
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  • WBGene00009012 status:Confirmed UniProt:G5EE80 protein_id:CAA91040.1 [WormBase]
  • pir||T21140 hypothetical protein F21D5.7 - Caenorhabditis elegans (fragment) [NCBI NR]
  • gi|3876124|emb|CAA92301.1| C. elegans protein F21D5.7, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|3876111|emb|CAA91040.1| C. elegans protein F21D5.7, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • pir||A88763 protein F21D5.7 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|17539958|ref|NP_501507.1| hypothetical protein F21D5.7 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE09524 WBGene00009012 signal recognition particle protein (SRP54) status:Confirmed TR:Q19639 protein_id:CAA91040.1 [wormpep150.fasta]
  • 09524 WBGene00009012 signal recognition particle protein (SRP54) status:Confirmed TR:Q19639 protein_id:CAA91040.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • signal recognition particle 54kDa (55.0 kD) (4J508) [Caenorhabditis elegans]gi|3876124|emb|CAA92301.1| Hypothetical protein F21D5.7 [Caenorhabditis elegans]gi|3876111|emb|CAA91040.1| Hypothetical protein F21D5.7 [Caenorhabditis elegans]gi|7499565|pir|| [nrdb_11152004_Chlamydomonas]
  • signal recognition particle protein (SRP54) status:Confirmed TR:Q19639 protein_id:CAA91040.1 [wormpep115.fasta.reversed]
  • CE09524 signal recognition particle protein (SRP54) status:Confirmed TR:Q19639 protein_id:CAA91040.1 [wormpep80.hongbin]
  • CE09524 WBGene00009012 signal recognition particle protein (SRP54) status:Confirmed UniProt:Q19639_CAEEL protein_id:CAA92301.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09524 WBGene00009012 signal recognition particle protein (SRP54) status:Confirmed UniProt:Q19639_CAEEL protein_id:CAA92301.1| [wormORF-contam.fasta]
  • Hypothetical protein F21D5.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F21D5.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE09524 WBGene00009012 signal recognition particle protein (SRP54) status:Confirmed UniProt:Q19639 protein_id:CAA92301.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09524 WBGene00009012 signal recognition particle protein (SRP54) status:Confirmed UniProt:G5EE80 protein_id:CAA91040.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE09524 WBGene00009012 status:Confirmed UniProt:G5EE80 protein_id:CAA91040.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F21D5.7 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 496 amino acids

    Gene Ontology:
    Cellular Component: signal recognition particle [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: SRP-dependent cotranslational protein targeting to membrane [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    nucleotide binding [IEALink to PubMed article]
    7S RNA binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLADLGRKI RNAIGKLGQS TVINEGELDL MLKEVCTALI ESDVHIRLVK QLKDNVKKAI  60
   61 NFEEIVGGAN KRRYIQKTVF NELLKLVDPG VTPFTPTKGR RNVFMFVGLQ GSGKTTTCTK 120
  121 MAYYYQRKGW KTCLICADTF RAGAFDQLKQ NATKARIPFY GSYSEIDPVK IAAEGVEKFT 180
  181 QEGFEIIIVD TSGRHKQEAS LFEEMLQVSN AVTPDNVVFV MDASIGQACE AQARAFSQTV 240
  241 DVASVIITKL DSHAKGGGAL SAVAVTKSPV IFIGTGEHID DFEIFKPKSF VQKLLGMGDI 300
  301 AGLVDMVNDI GIQDNKELVG RLKQGQFTLR DMYEQFQNIM KMGPFSQIMG MIPGFGSEFM 360
  361 TKGNEQESVN RLKRMMTVMD SMSDKELDHP KASELFTKEP NRVARVARGS GSHQQEVRDL 420
  421 LAQYKKFSDV VKKIGSIKGL FNGKNGDINP KNMNPAKMAQ LNQQMAKMMD PRVLQQMGGM 480
  481 GGLQNMMQQM ARAGKM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..496] PSI-BLAST 120.0 No description for 2j37W was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle