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Protein Overview: CE09232

General Information:
Name(s) found: CE09232 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00017238 U1 small nuclear ribonucleoprotein C status:Confirmed UniProt:P90815 protein_id:CCD67653.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 142 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKYYCDYCD TFLTHDSPSV RKTHNGGRKH KDNVRMFYQK WMEDQAQKLV DQTARAFATN  60
   61 RMQGAVPRTT MGMAPVPPVG HHPMMGGPPG MPMMAPRPFP GPGVGFPGAP GMPPFPGGPM 120
  121 GMAGPPGMPP MMPRPPQQFR PM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] PSI-BLAST 33.69897 The structure of the zinc finger from the human spliceosomal protein U1C
    2 View Details [63..142] FFAS03 1.33 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.414217765611205 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle