YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE09232
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKYYCDYCD TFLTHDSPSV RKTHNGGRKH KDNVRMFYQK WMEDQAQKLV DQTARAFATN  60
   61 RMQGAVPRTT MGMAPVPPVG HHPMMGGPPG MPMMAPRPFP GPGVGFPGAP GMPPFPGGPM 120
  121 GMAGPPGMPP MMPRPPQQFR PM

Type	Start	End	Confidence
Cytoplasmic	1	64	0.77
Transmembrane Helix	65	85	0.56
Non-Cytoplasmic	86	105	0.77
Transmembrane Helix	106	128	0.61
Cytoplasmic	129	142	0.55