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Protein Overview: CE08960

General Information:
Name(s) found: CE08960 [WormBase]
Description(s) found:
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  • WBGene00008269 status:Partially_confirmed UniProt:O17702 protein_id:CAB03991.1 [WormBase]
  • pir||T20170 hypothetical protein C53A5.11 - Caenorhabditis elegans [NCBI NR]
  • gi|3875206|emb|CAB03991.1| Hypothetical protein C53A5.11 [Caenorhabditis elegans] [NCBI NR]
  • gi|17558898|ref|NP_506607.1| hypothetical protein C53A5.11 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08960 WBGene00008269 ring canal protein like status:Predicted TR:O17702 protein_id:CAB03991.1 [wormpep150.fasta]
  • 08960 WBGene00008269 ring canal protein like status:Predicted TR:O17702 protein_id:CAB03991.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, kelch-like protein family member (5P41) [Caenorhabditis elegans]gi|3875206|emb|CAB03991.1| Hypothetical protein C53A5.11 [Caenorhabditis elegans]gi|7497843|pir||T20170 hypothetical protein C53A5.11 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • ring canal protein like status:Predicted TR:O17702 protein_id:CAB03991.1 [wormpep115.fasta.reversed]
  • CE08960 ring canal protein like status:Predicted TR:O17702 protein_id:CAB03991.1 [wormpep80.hongbin]
  • CE08960 WBGene00008269 ring canal protein like status:Predicted UniProt:O17702_CAEEL protein_id:CAB03991.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08960 WBGene00008269 ring canal protein like status:Predicted UniProt:O17702_CAEEL protein_id:CAB03991.1| [wormORF-contam.fasta]
  • C53A5.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C53A5.11 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08960 WBGene00008269 ring canal protein like status:Predicted UniProt:O17702 protein_id:CAB03991.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08960 WBGene00008269 ring canal protein like status:Partially_confirmed UniProt:O17702 protein_id:CAB03991.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE08960 WBGene00008269 status:Partially_confirmed UniProt:O17702 protein_id:CAB03991.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C53A5.11 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 430 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: proteolysis [IEALink to PubMed article]
    Molecular Function: subtilase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHEMNTKFY INLMLARFVI SAFSALKDSS ITSLGIPRHR QGIIGVEKMT NHIFSDSESD  60
   61 RESGASEFDY HSDSQSEETQ HPKAIEMRNQ FRNTTENLIQ TLQMFFGILS FELYEGKDNL 120
  121 KCITMIHDIT SLMEVADTKL KNYINTLNSK EQIFMVDDGV LNMDPILVAD RKQNSREPLF 180
  181 IGYFKPDTMS FMPIGRLPNP KSHYAVVSSS TKVFIIGGMN NGTYLNRVEM FDKEKGIRVE 240
  241 CTRLMHGRTR TSACIHEDAI YAVGGYDATY MSSVEIYDIK TGGDWTTGPS LNNRRADASV 300
  301 VSFYGQLFVL GGFNGKDYEE TIEKLSDSKD KFEVCGNMVG RAGFGACVFR GRIYVAGGWN 360
  361 TPCNTLKTFQ SYDPLTNTWK DEPSMNTGRK YFKLHATNEA IYAIRGCSHD WDLIKETERF 420
  421 DPQTLTWATS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] PSI-BLAST 4.0 No description for 2cn3A was found.
    2 View Details [145..430] PSI-BLAST 74.522879 Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle