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Protein Overview: CE08887

General Information:
Name(s) found: CE08887 [WormBase]
Description(s) found:
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  • WBGene00016806 status:Partially_confirmed UniProt:O44798 protein_id:CCD65334.1 [WormBase]
  • pir||T32785 hypothetical protein C50D2.2 - Caenorhabditis elegans [NCBI NR]
  • gi|2746784|gb|AAB94950.1| Hypothetical protein C50D2.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|17532491|ref|NP_493662.1| hypothetical protein C50D2.2 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08887 WBGene00016806 amino acid permease status:Partially_confirmed TR:O44798 protein_id:AAB94950.1 [wormpep150.fasta]
  • 08887 WBGene00016806 amino acid permease status:Partially_confirmed TR:O44798 protein_id:AAB94950.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • solute carrier family 7 member (2A399) [Caenorhabditis elegans]gi|2746784|gb|AAB94950.1| Hypothetical protein C50D2.2 [Caenorhabditis elegans]gi|7497727|pir||T32785 hypothetical protein C50D2.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • amino acid permease status:Partially_confirmed TR:O44798 protein_id:AAB94950.1 [wormpep115.fasta.reversed]
  • CE08887 amino acid permease status:Predicted TR:O44798 protein_id:AAB94950.1 [wormpep80.hongbin]
  • CE08887 WBGene00016806 amino acid permease status:Partially_confirmed UniProt:O44798_CAEEL protein_id:AAB94950.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08887 WBGene00016806 amino acid permease status:Partially_confirmed UniProt:O44798_CAEEL protein_id:AAB94950.1| [wormORF-contam.fasta]
  • Hypothetical protein C50D2.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C50D2.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08887 WBGene00016806 amino acid permease status:Partially_confirmed UniProt:O44798 protein_id:AAB94950.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08887 WBGene00016806 amino acid permease status:Partially_confirmed UniProt:O44798 protein_id:CCD65334.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE08887 WBGene00016806 status:Partially_confirmed UniProt:O44798 protein_id:CCD65334.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C50D2.2 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 589 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: gamma-aminobutyric acid transport [IEALink to PubMed article]
    amino acid transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: L-gamma-aminobutyric acid transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCFSALRERV FRLKNLPAGE IATPLRRCLS TFDITLLGVG HMIGAGIYVL TGSVVRNTAG  60
   61 PSIILSFLLA GFASLLSALC YAEFGARFPK AGSAYTYTYV GVGELWAFVI GWNIILEHML 120
  121 GAAAVARSWS GYLDSLLGNV ISNSTIARTG HLHEASSFFG DYPDLLAFLL IVLVAFFVAL 180
  181 GSKVSTNFNS FLTILNIGIV VIVVFYGITF ADFSLWSGVD EKGNSRFFPY GVSGMFAGAA 240
  241 SCFFAYIGFD GLATAGEEAK DPARSIPIAT FSSMTIVTLS YVLMSASLTL MIPYNMVHPT 300
  301 AAFSDAFTMR GAEFASYAVS VGALFGMTTS LVGGMFALPR CVFSMADDGL LFSSLASVNP 360
  361 KTQVPTQALL IFGFLTAIIA LLFDITTLVE FLSIGTLLAY SIVSACVIVL RYQPAYNVDE 420
  421 GQFDNGGKLR FSIPFCGFLD KLQPGHSIYY GMSVMIASMF FSGLGFSSGY LYGTVLCQIF 480
  481 LLVNIALIIL SFLFICAHYP NNTPLDFKVP LVPLIPALSL LINTLMMVHL AWITWLRLVV 540
  541 WMSIGFVIYF GYGIHHSKEE VQDAEKFSKS STYESVVSGV VAGAGTTSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..421] FFAS03 1.54 Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters
    2 View Details [422..494] deduced N/A No confident structure predictions are available.
    3 View Details [495..589] MSA 1.352987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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