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Protein Overview: ceh-37

General Information:
Name(s) found: ceh-37 / CE08624 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00000458 locus:ceh-37 Homeobox protein ceh-37 status:Confirmed UniProt:Q93356 protein_id:CAB02825.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: chromosome, telomeric region [IDALink to PubMed article]
    nucleus [IEALink to PubMed article]
    Biological Process: mRNA transcription [ISSLink to PubMed article]
    telomere maintenance [TASLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    cell fate specification [IMP]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    telomeric DNA binding [IDALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSYSYFTIP STATTGFNYP VQPMTMFSGA PYNAAMIPRK NRRERTTYSR QQLEILETLF  60
   61 NETQYPDVFA RERVADQIRL QESRIQVWFK NRRAKYRLQE KQKPKRSNEK SQEHKSEDQQ 120
  121 QTDVLDGEPL KGGSPGYQPQ IKSELESCDG AVASGKLGTP KSISPVETTA STTSSNTSAA 180
  181 ELQWNGDHKI LGFGKNETTT SAAVSPTADN ASTPSSSSSI TATSSLPTTS SSLSVYNYPA 240
  241 IYPQWGLDYS TYANPQYAQF SHNPYAGTPF WYSNGNNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] PSI-BLAST 21.0 Paired protein
    2 View Details [105..278] MSA 18.662997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.57523737355937 bayes_pls_golite062009
  • DNA binding
    		•  3.00143272905695 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.89825020286436 bayes_pls_golite062009
  • transcription factor activity
    		•  2.53664874743748 bayes_pls_golite062009
  • binding
    		•  1.68817361068715 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.14821760889085 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.46503550280898 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.20862059645422 bayes_pls_golite062009
  • protein binding
    		•  0.111941607625758 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle