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Protein Overview: srab-10

General Information:
Name(s) found: srab-10 / CE08596 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00016476 locus:srab-10 status:Partially_confirmed UniProt:Q8ITZ6 protein_id:CCD66860.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 320 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLSTSSFL QFTLLLNLIA GAIAFVLTIA ASYALWKSRV TKLFHINVII IFQVHLAGFF  60
   61 IHCFNRIILH ASDLYRYTLL DYCDMPSSTT RCFAFRIQYV YGLWLVGATT VPLVIERYIA 120
  121 TIKSSSYEHI GYRLGIYLAL LQVTIAFICT FIAFHEFSFD EPTMSYCIGV KFGEFNNAEI 180
  181 VSLVNLVVQI IARICFQFLF KQNEKLRSEQ LTSTLSTRYS LEQNLKSIEI LKCFANLQCA 240
  241 FMIVHMVLFV YILQSDADFE QSTYIALVEL NSPHPFYAIV SILAFFRTVH SSEVKLKKNL 300
  301 QNHVNADQNV YFENFNKILQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..320] PSI-BLAST 40.0 Rhodopsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  1.40205587023688 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.40205587023688 bayes_pls_golite062009
  • receptor activity
    		•  1.39249706683393 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  1.04604785247703 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  1.016863453778 bayes_pls_golite062009
  • binding
    		•  0.101461761820711 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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