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Protein Overview: CE08185

General Information:
Name(s) found: CE08185 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00007616 locus:rpoa-12 DNA-directed RNA polymerase subunit status:Confirmed UniProt:O17587 protein_id:CAB02739.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 119 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transcription [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    DNA binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]
    DNA-directed RNA polymerase activity [IEALink to PubMed article]
    transcription regulator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNFLSYDD DFCGYCGAIL ELPAQAPATV SCKVCSTRWA VKERVDQVVS RVEKIYERTV  60
   61 ADTDGIENDE SADAVVDHIC TKCGHSKASY STMQTRSADE GQTVFYTCLK CKKKDIEYS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] PSI-BLAST 22.39794 RBP9 subunit of RNA polymerase II


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle