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Protein Overview: ncx-9

General Information:
Name(s) found: ncx-9 / CE08141 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00003574 locus:ncx-9 status:Partially_confirmed UniProt:O16242 protein_id:CCD64394.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 651 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: transmembrane transport [IEALink to PubMed article]
    locomotion [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCSSEECLID KSWTSEEKCE YIKCNQDSCE GGGYLTWSHY VKCQYNIGVR VILIILGILY  60
   61 LIILFVIMSS IADDFFCPAI SGIVSHLRMS ESIAGVTFLA FGNGAPDVFS SISSVLTTPK 120
  121 PKADLALGDL FGTSIFVTTV VLAIIIFTKS FKVAIIPTLR DLIFYMTTLA FIVFCFLKFD 180
  181 KIEVWMPATF LGIYGVYVVT VIILGIYRTH RKKRNLKKKN KELEDFLSRP SSAASTTPIF 240
  241 GAMKLKEETI SVSALFHFMI GYSQFIKNLT RANLKRTTNN NNNDNKNEKR GIVNLGFSEP 300
  301 YSIPSERKIS TIFKQNTFET DLESLESLAD LDGSDDEGRE EKFGYAHHTV FTSHDQISLV 360
  361 ASEIEEIEIT TWRSWDWVWD LFNHLKSWPS RDEFSEMNIF IKIVTVIKVV PVFFFKLTVP 420
  421 SNEMSWCKPL FILHCFASIQ FALFSIQIIT LKPFDGSPGL WLYGLGFSAI LAMVAMYFLP 480
  481 LSKEQKYYKE IYSYLGFLMS IAWIYATSNE IVSVVTMIGV VTGLSMELLG LTIMAWSNCI 540
  541 GDIVADIAVV KQGYPKMAMA AAIGGPLFNL LIGFGLPFTI AAAQGKEMEL LINPVYRLLM 600
  601 LFLGISLVTT FVALFIQRFT VRRPHAVLLI FIFVVFLIFI CLAEFHVLEW N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] Pfam 32.200659 No description for PF01699.15 was found. No confident structure predictions are available.
    2 View Details [213..385] deduced N/A No confident structure predictions are available.
    3 View Details [386..480] deduced N/A No confident structure predictions are available.
    4 View Details [481..651] Pfam 29.886057 No description for PF01699.15 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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