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Protein Overview: srh-49

General Information:
Name(s) found: srh-49 / CE08083 [WormBase]
Description(s) found:
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  • WBGene00005272 locus:srh-49 status:Predicted UniProt:P91030 protein_id:CCD64180.1 [WormBase]
  • pir||G87801 protein C10G11.4 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|1825620|gb|AAB42244.1| Serpentine receptor, class h protein 49 [Caenorhabditis elegans] [NCBI NR]
  • gi|17508745|ref|NP_491816.1| Serpentine Receptor, class H family member (srh-49) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08083 WBGene00005272 locus:srh-49 7TM chemoreceptor, srh family status:Predicted TR:P91030 protein_id:AAB42244.1 [wormpep150.fasta]
  • 08083 WBGene00005272 locus:srh-49 7TM chemoreceptor, srh family status:Predicted TR:P91030 protein_id:AAB42244.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • serpentine Receptor, class H (srh-49) [Caenorhabditis elegans]gi|1825620|gb|AAB42244.1| Serpentine receptor, class h protein 49 [Caenorhabditis elegans]gi|25395299|pir||G87801 protein C10G11.4 [imported] - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:srh-49 7TM chemoreceptor, srh family status:Predicted TR:P91030 protein_id:AAB42244.1 [wormpep115.fasta.reversed]
  • CE08083 locus:srh-49 chemoreceptor status:Predicted [wormpep80.hongbin]
  • CE08083 WBGene00005272 locus:srh-49 7TM chemoreceptor, srh family status:Predicted UniProt:P91030_CAEEL protein_id:AAB42244.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08083 WBGene00005272 locus:srh-49 7TM chemoreceptor, srh family status:Predicted UniProt:P91030_CAEEL protein_id:AAB42244.1| [wormORF-contam.fasta]
  • Serpentine Receptor, class H family member (srh-49) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Serpentine receptor, class h protein 49 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08083 WBGene00005272 locus:srh-49 7TM chemoreceptor, srh family status:Predicted UniProt:P91030 protein_id:AAB42244.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08083 WBGene00005272 locus:srh-49 7TM chemoreceptor, srh family status:Predicted UniProt:P91030 protein_id:CCD64180.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE08083 WBGene00005272 locus:srh-49 status:Predicted UniProt:P91030 protein_id:CCD64180.1 7TM GPCR, serpentine receptor class h (Srh) [wormpep246-ecoli-contam.fasta]
  • Serpentine Receptor, class H OS=Caenorhabditis elegans GN=srh-49 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: receptor-mediated endocytosis [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFPTSLQDY YATNYTRCSE LFSIFSTSEF LSFGAKSQFF VLVPINLFGF YCILFKTPKY  60
   61 MSEFQFHLCH LQFWFTVLTI FYTILTTPYH FFPASVRCSV GLFRDMNISS TYQLLLINIV 120
  121 TGGIVSAVIL LFENRHKHLV PPTDIFYKIN GVHRLILGIF NFLLGSLGAW TIFLQDGNQE 180
  181 LVKMEYLKLV PCPTKLYFDE CSVAIPSAKN IWALGVGPAG CLIPIQVIFF ISHSLMYLRK 240
  241 IQNINTFSKR TKKLQKSFFR AGIAQVTSPI LVIVVPLFLL TYILITKQYL PGAMNICILC 300
  301 IPSHSALSTG SLILFNVPYR DFVRHKFKIT ANSVQRNSRV AIVSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] PSI-BLAST 40.0 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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