| Protein: | srh-49 |
| Organism: | Caenorhabditis elegans |
| Length: | 345 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srh-49.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..2] | [343..135] |
|
Region A: Residues: [1-345] |
1 11 21 31 41 51
| | | | | |
1 MSFPTSLQDY YATNYTRCSE LFSIFSTSEF LSFGAKSQFF VLVPINLFGF YCILFKTPKY 60
61 MSEFQFHLCH LQFWFTVLTI FYTILTTPYH FFPASVRCSV GLFRDMNISS TYQLLLINIV 120
121 TGGIVSAVIL LFENRHKHLV PPTDIFYKIN GVHRLILGIF NFLLGSLGAW TIFLQDGNQE 180
181 LVKMEYLKLV PCPTKLYFDE CSVAIPSAKN IWALGVGPAG CLIPIQVIFF ISHSLMYLRK 240
241 IQNINTFSKR TKKLQKSFFR AGIAQVTSPI LVIVVPLFLL TYILITKQYL PGAMNICILC 300
301 IPSHSALSTG SLILFNVPYR DFVRHKFKIT ANSVQRNSRV AIVSS
|
| Detection Method: |  |
| Confidence: | 40.0 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
