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Protein Overview: str-227

General Information:
Name(s) found: str-227 / CE07994 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00006258 locus:str-227 status:Partially_confirmed UniProt:O16326 protein_id:CCD62488.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 351 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGKEWSALL KLIQDVSAVF SIVINTFLIA LILTKSPKQL GAYKWLMIYI SVFEIFYSIL  60
   61 DVVLVPQHYS HGPTFLVIVG LKDKLFGPAG LLILNSCYWG CFGASMAVFA VHFVYRWLVV 120
  121 TEHPLLETFN GWKIWIWFSV PMWYGLTWIC TGYILSAPNE HTSRFIKDNV KEIFDLEFDE 180
  181 YVYLGPFLYE KTDNGTIDVH IVPFIGLGII SGTIVSSIII VLVFGILCYQ KINKLVATTA 240
  241 ASAKLIKLQR QLFYALVIQT LVPFILMHIP AAIMFAFVFL DIDLGVYSAV VSMTIAIYPA 300
  301 VDPIPTLVIV ENYRKTIIRY LKLDCVKRSS VAVATSTTEA RSAKASDPVP S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..351] PSI-BLAST 40.69897 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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