| Protein: | str-227 |
| Organism: | Caenorhabditis elegans |
| Length: | 351 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for str-227.
| Description | E-value | Query Range |
Subject Range |
|
|
172.0 | [0..7] | [351..97] |
|
Region A: Residues: [1-351] |
1 11 21 31 41 51
| | | | | |
1 MLGKEWSALL KLIQDVSAVF SIVINTFLIA LILTKSPKQL GAYKWLMIYI SVFEIFYSIL 60
61 DVVLVPQHYS HGPTFLVIVG LKDKLFGPAG LLILNSCYWG CFGASMAVFA VHFVYRWLVV 120
121 TEHPLLETFN GWKIWIWFSV PMWYGLTWIC TGYILSAPNE HTSRFIKDNV KEIFDLEFDE 180
181 YVYLGPFLYE KTDNGTIDVH IVPFIGLGII SGTIVSSIII VLVFGILCYQ KINKLVATTA 240
241 ASAKLIKLQR QLFYALVIQT LVPFILMHIP AAIMFAFVFL DIDLGVYSAV VSMTIAIYPA 300
301 VDPIPTLVIV ENYRKTIIRY LKLDCVKRSS VAVATSTTEA RSAKASDPVP S
|
| Detection Method: |  |
| Confidence: | 40.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
