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Protein Overview: CE07912

General Information:
Name(s) found: CE07912 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015423 status:Confirmed UniProt:O01464 protein_id:CCD62895.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IEALink to PubMed article]
    DNA replication [IEALink to PubMed article]
    metabolic process [IEALink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: ATP binding [IEALink to PubMed article]
    DNA ligase (ATP) activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSTAPSSA SSDADSLNHD ENPIKAVIFD YGEVMWMQSR NVHVYRKIEE DNKLFDNSLI  60
   61 PTLVSKELSS ILPKGFQEDL LTGIYTAKDF DRLFLSAYNR KFGSQVESLK FFSATEYDND 120
  121 AVYEEAVLTA CQKLRERGVK TILMLDTYHV DEKRNGRRIP NMEKYFDHVI ESCKEGVKKP 180
  181 DPRFYQIALD CVDVQPEEVI YIDDSKINCE SAAVLGIRYI QVFNSMDMLE DLQEILGFDL 240
  241 D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] PSI-BLAST 34.30103 No description for 2hszA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.02290994020378 bayes_pls_golite062009
  • hydrolase activity
    		•  0.71914501009647 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle