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Protein Overview: clec-41

General Information:
Name(s) found: clec-41 / CE07723 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00007153 locus:clec-41 status:Confirmed UniProt:P90732 protein_id:CAB02691.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of multicellular organism growth [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    Molecular Function: sugar binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFHSTLLLA ILVAVSADTC PAGFTALSTS KKCVKLITDV AKHSDATANC SSYGGHLISV  60
   61 QNAIDNNAYL QLAAVSVTPY WLGIKCSLSG NPASCQWDDQ SGNAGGYNGF APGYPLVEVG 120
  121 NCVYVPTSGS FAGKWLSGDC NTMSLNFICE TAPTSPITDT CSFQYNGNCY YPSLSALPKQ 180
  181 DAQFSCQQAC GNLVSIHSIE ENNYVQSLFT TNAPTYIRIG AVANNQNSNS WIDGTSWNYD 240
  241 NIGYSNINLG MCWSMALSND IVSTGKWISS YCDTSLPFVC KRKVGTQCGT TSGPTQTPGQ 300
  301 CTSPMFMDNS GRFYSPSWPY SYIGEQNPCN YILDTPVGSL VQIRFPVMNL DSQASISIYS 360
  361 RIEDTTPLVV LQGNSASNQW YTSTTNTMKV VFRPCIANCP NDGVNYRWEA DFKPSTDVTQ 420
  421 PPVTVTPNPN NPSGCNSTIL VAPGSISTPN YPNYYPNFLL CMYHLSTTGG YRINLDFGAI 480
  481 DTEQCCDIIE VHDGPLLGSP KLGIVSGTWP AHAKTYQSSS NSMLVTFSTD SSGQGSGFSA 540
  541 NFWAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..150] PSI-BLAST 12.69897 Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.
    2 View Details [151..323] PSI-BLAST 4.09691 E-selectin; E-selectin, EGF-domain
    3 View Details [324..545] PSI-BLAST 30.69897 Mannose-binding protein associated serine protease 2, MASP2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.13629480035749 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.44675717945952 bayes_pls_golite062009
  • protein binding
    		•  0.059857076934361 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.13629480035749 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.44675717945952 bayes_pls_golite062009
  • protein binding
    		•  0.059857076934361 bayes_pls_golite062009
    3
    Term Confidence Notes
  • receptor binding
    		•  1.40618339011373 bayes_pls_golite062009
  • growth factor activity
    		•  0.25853515067422 bayes_pls_golite062009
  • binding
    		•  0.246892638113776 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle