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Protein Overview: cth-2

General Information:
Name(s) found: cth-2 / CE07648 [WormBase]
Description(s) found:
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  • WBGene00022856 locus:cth-2 Putative cystathionine gamma-lyase 2 status:Confirmed UniProt:P55216 protein_id:CCD73724.1 [WormBase]
  • pir||C88197 protein ZK1127.10 [imported] - Caenorhabditis elegans [NCBI NR]
  • gi|17538055|ref|NP_495449.1| hypothetical protein ZK1127.10 [Caenorhabditis elegans] [NCBI NR]
  • gi|1705787|sp|P55216.1|CGL_CAEEL RecName: Full=Putative cystathionine gamma-lyase; AltName: Full=Gamma-cystathionase [NCBI NR]
  • gi|1330380|gb|AAB93432.1| Hypothetical protein ZK1127.10 [Caenorhabditis elegans] [NCBI NR]
  • Putative cystathionine gamma-lyase OS=Caenorhabditis elegans GN=ZK1127.10 PE=2 SV=1 [Swiss-Prot]
  • Putative cystathionine gamma-lyase 2 OS=Caenorhabditis elegans GN=cth-2 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE07648 WBGene00022856 cystathionine gamma-lyase status:Confirmed SW:P55216 protein_id:AAB93432.1 [wormpep150.fasta]
  • 07648 WBGene00022856 cystathionine gamma-lyase status:Confirmed SW:P55216 protein_id:AAB93432.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cystathionine gamma-lyase (43.1 kD) (2H346) [Caenorhabditis elegans]gi|1330380|gb|AAB93432.1| Hypothetical protein ZK1127.10 [Caenorhabditis elegans]gi|25292071|pir||C88197 protein ZK1127.10 [imported] - Caenorhabditis elegansgi|1705787|sp|P55216|CGL_C [nrdb_11152004_Chlamydomonas]
  • cystathionine gamma-lyase status:Confirmed SW:P55216 protein_id:AAB93432.1 [wormpep115.fasta.reversed]
  • CE07648 cystathionine gamma-lyase status:Partially_confirmed SW:P55216 protein_id:AAB93432.1 [wormpep80.hongbin]
  • CE07648 WBGene00022856 cystathionine gamma-lyase status:Confirmed UniProt:P55216 protein_id:AAB93432.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07648 WBGene00022856 cystathionine gamma-lyase status:Confirmed UniProt:P55216 protein_id:AAB93432.1| [wormORF-contam.fasta]
  • Putative cystathionine gamma-lyase (Gamma-cystathionase) [nr-271106-contam.fasta]
  • ZK1127.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein ZK1127.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE07648 WBGene00022856 locus:cth-2 cystathionine gamma-lyase status:Confirmed UniProt:P55216 protein_id:AAB93432.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE07648 WBGene00022856 locus:cth-2 cystathionine gamma-lyase status:Confirmed UniProt:P55216 protein_id:CCD73724.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE07648 WBGene00022856 locus:cth-2 status:Confirmed UniProt:P55216 protein_id:CCD73724.1 Putative cystathionine gamma-lyase 2 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: cellular amino acid metabolic process [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    cystathionine beta-lyase activity [IEALink to PubMed article]
    transferase activity, transferring alkyl or aryl (other than methyl) groups [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFPHFGTA AIHVGQEPEQ WDMNQVVPPI SLSSTYKQDN PGEPKGHDYS RAGNPTRDVL  60
   61 QKNLAALEDA KHCQVFSSGL AATSAIINLL KYGDHIVCSD DVYGGTQRYI RRVAVPNHGL 120
  121 EVDSVDLTDV QNLEKAIKPN TKMVWFESPS NPLLKVVDIA AVVQTAKKAN PEIVVVVDNT 180
  181 FMSPYFQRPI SLGADVVVHS ITKYINGHSD VVMGAVITDN DEFQQHLFFM QLAVGAVPSP 240
  241 FDCFLVNRGL KTLHIRMRAH YENALAVAKY LEANDRIESV LYPALPSHPQ HEVHEKQTKG 300
  301 MSGMISFYLK GELQESRAFL SALKVFTLAE SLGGYESLAE LPSIMTHASV PAETRIVLGI 360
  361 TDNLIRISVG IEDLDDLVAD LDQALKIAIP KV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 102.0 No description for 2nmpA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle