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View Structure Prediction Details

Protein: cth-2
Organism: Caenorhabditis elegans
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cth-2.

Description E-value Query
Range
Subject
Range
gi|75910353, gi|... - gi|75910353|ref|YP_324649.1| cystathionine gamma-lyase [Anabaena variabilis ATCC 29413], gi|75704078...
403.0 [0..5] [386..1]

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Predicted Domain #1
Region A:
Residues: [1-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATFPHFGTA AIHVGQEPEQ WDMNQVVPPI SLSSTYKQDN PGEPKGHDYS RAGNPTRDVL  60
   61 QKNLAALEDA KHCQVFSSGL AATSAIINLL KYGDHIVCSD DVYGGTQRYI RRVAVPNHGL 120
  121 EVDSVDLTDV QNLEKAIKPN TKMVWFESPS NPLLKVVDIA AVVQTAKKAN PEIVVVVDNT 180
  181 FMSPYFQRPI SLGADVVVHS ITKYINGHSD VVMGAVITDN DEFQQHLFFM QLAVGAVPSP 240
  241 FDCFLVNRGL KTLHIRMRAH YENALAVAKY LEANDRIESV LYPALPSHPQ HEVHEKQTKG 300
  301 MSGMISFYLK GELQESRAFL SALKVFTLAE SLGGYESLAE LPSIMTHASV PAETRIVLGI 360
  361 TDNLIRISVG IEDLDDLVAD LDQALKIAIP KV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 102.0
Match: 2nmpA
Description: No description for 2nmpA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle