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Protein Overview: taf-10

General Information:
Name(s) found: taf-10 / CE07323 [WormBase]
Description(s) found:
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  • WBGene00006392 locus:taf-10 status:Confirmed UniProt:Q21172 protein_id:CCD71025.1 [WormBase]
  • pir||T29725 hypothetical protein K03B4.3 - Caenorhabditis elegans [NCBI NR]
  • gi|17562110|ref|NP_504261.1| TAF (TBP-associated transcription factor) family member (taf-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|1280100|gb|AAA97996.1| Taf (tbp-associated transcription factor) family protein 10, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE07323 WBGene00006392 locus:taf-10 status:Confirmed TR:Q21172 protein_id:AAA97996.1 [wormpep150.fasta]
  • 07323 WBGene00006392 locus:taf-10 status:Confirmed TR:Q21172 protein_id:AAA97996.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • TBP-Associated transcription Factor family member (19.6 kD) (taf-10) [Caenorhabditis elegans]gi|1280100|gb|AAA97996.1| Taf (tbp-associated transcription factor) family protein 10, isoform a [Caenorhabditis elegans]gi|7505208|pir||T29725 hypothetical pro [nrdb_11152004_Chlamydomonas]
  • locus:taf-10 status:Confirmed TR:Q21172 protein_id:AAA97996.1 [wormpep115.fasta.reversed]
  • CE07323 status:Confirmed TR:Q21172 protein_id:AAA97996.1 [wormpep80.hongbin]
  • CE07323 WBGene00006392 locus:taf-10 status:Confirmed UniProt:Q21172_CAEEL protein_id:AAA97996.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07323 WBGene00006392 locus:taf-10 status:Confirmed UniProt:Q21172_CAEEL protein_id:AAA97996.1| [wormORF-contam.fasta]
  • Taf (tbp-associated transcription factor) family protein 10, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • TAF (TBP-associated transcription factor) family member (taf-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07323 WBGene00006392 locus:taf-10 status:Confirmed UniProt:Q21172 protein_id:AAA97996.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE07323 WBGene00006392 locus:taf-10 status:Confirmed UniProt:Q21172 protein_id:CCD71025.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of Q95ZS0, TAF (TBP-associated transcription factor) family OS=Caenorhabditis elegans GN=taf-10 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 176 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed articleLink to PubMed article]
    transcription initiation [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: RNA polymerase II transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDPEQYEPS SSTESVLMPP PALPQRPAAA PQVYSTLEPS VQNLRSSLHK PLTGNQQQFV  60
   61 QKTLENVQKN PSQDDTHEFI NQLADYPPTI PDSVTLHFLK SAGVDGSDPR VTRMISLAAQ 120
  121 KHVSDIILDA MTSARMKGLG QTKKGTKDTK YTLTEELLDE ILKEYGHQNT RPPYHT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] FFAS03 1.27 Archaeal histone

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.37193420606584 bayes_pls_golite062009
  • DNA binding
    		•  0.400531218539453 bayes_pls_golite062009
  • protein binding
    		•  0.32342954268389 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.245546411181381 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle