Protein Overview: cdd-1

General Information:
Name(s) found:	cdd-1 / CE06962 [WormBase]
Description(s) found: Found 19 descriptions. SHOW ALL	WBGene00000391 locus:cdd-1 status:Confirmed UniProt:Q22922 protein_id:CCD64989.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	158 amino acids
Gene Ontology:
Cellular Component:	intracellular [IDA]
Biological Process:	cytidine metabolic process [IEA] RNA metabolic process [ISS] RNA modification [IDA]
Molecular Function:	zinc ion binding [IEA] cytidine deaminase activity [IEA][ISS] hydrolase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTKANLTE FEQQLVDKAI GAMENAYCKY SNFKVGAALV CDDGEIIIGA NHENASYGAT  60
   61 ICAERSAIVT ALTKGHRKFK YIVVATELEA PCSPCGVCRQ VLIEFGDYKV ILGSSTSDQI 120
  121 IETTTYELLP YAFTPKSLDD HEKETEERKH HNDHNNKE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..158]	PSI-BLAST	32.30103	No description for 1zabA was found.

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
cytidine deaminase activity	4.42667374679603	bayes_pls_golite062009
deaminase activity	2.76997916054448	bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	2.27736397496642	bayes_pls_golite062009
catalytic activity	1.70756445127105	bayes_pls_golite062009
binding	1.64474382695496	bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.51294035758003	bayes_pls_golite062009
IMP cyclohydrolase activity	1.34771936728813	bayes_pls_golite062009
receptor binding	1.25331530291023	bayes_pls_golite062009
hydrolase activity	1.20889076546073	bayes_pls_golite062009
phosphoribosylaminoimidazolecarboxamide formyltransferase activity	1.06178740854563	bayes_pls_golite062009
nucleoside binding	0.66793245260795	bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity	0.36832789692523	bayes_pls_golite062009
cyclohydrolase activity	0.308525511259279	bayes_pls_golite062009
transition metal ion binding	0.25533482618887	bayes_pls_golite062009
protein binding	0.072557222523031	bayes_pls_golite062009
glycine hydroxymethyltransferase activity	0.0520808212384716	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle