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Protein Overview: CE06829

General Information:
Name(s) found: CE06829 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00015771 locus:got-1.3 status:Partially_confirmed UniProt:Q17983 protein_id:CCD64516.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 364 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biosynthetic process [IEALink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEALink to PubMed article]
    transferase activity, transferring nitrogenous groups [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQIHIRNEV IMANSYGEML DVLRALLEDY VQRLERLDQV LIQVMELNPG EFRDRQRLMQ  60
   61 DIRDLIQETT FQAREVRVAR RMVRTLHERE SHHLICKKAG FTTVAEYTFW NYEEKCVDIE 120
  121 KLLSDLEFAP AKSVIILPAC AYNPTGMDLS ENQWKQIARV IKRKRLFPFF DISYQGCASG 180
  181 DPAADSWAIR HFVSDGIELF VAQSFAKNLF FTNPRLGNLT VVVNNAAVIP GIKSQMSLAI 240
  241 RINAFYPTAF GATIVHKVLS TSARREFWIQ SIQQISSRIK QMRTALFDVL SALKTPGSWD 300
  301 HIIRQTGMFS YTGLTSTQVD HLVRNHKVFL LSDGRINISG LNMKNVEYVA KAIDETVRAV 360
  361 KSNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..364] PSI-BLAST 72.0 Aspartate aminotransferase, AAT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.76873005093488 bayes_pls_golite062009
  • transferase activity
    		•  0.3093369052482 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle