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View Structure Prediction Details

Protein: CE06829
Organism: Caenorhabditis elegans
Length: 364 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE06829.

Description E-value Query
Range
Subject
Range
gi|74213886 - gi|74213886|dbj|BAE29370.1| unnamed protein product [Mus musculus]
290.0 [0..14] [358..9]

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Predicted Domain #1
Region A:
Residues: [1-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQIHIRNEV IMANSYGEML DVLRALLEDY VQRLERLDQV LIQVMELNPG EFRDRQRLMQ  60
   61 DIRDLIQETT FQAREVRVAR RMVRTLHERE SHHLICKKAG FTTVAEYTFW NYEEKCVDIE 120
  121 KLLSDLEFAP AKSVIILPAC AYNPTGMDLS ENQWKQIARV IKRKRLFPFF DISYQGCASG 180
  181 DPAADSWAIR HFVSDGIELF VAQSFAKNLF FTNPRLGNLT VVVNNAAVIP GIKSQMSLAI 240
  241 RINAFYPTAF GATIVHKVLS TSARREFWIQ SIQQISSRIK QMRTALFDVL SALKTPGSWD 300
  301 HIIRQTGMFS YTGLTSTQVD HLVRNHKVFL LSDGRINISG LNMKNVEYVA KAIDETVRAV 360
  361 KSNV

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Detection Method: PSI-BLAST
Confidence: 72.0
Match: 1ajrA
Description: Aspartate aminotransferase, AAT
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.76873005093488 bayes_pls_golite062009
transferase activity 0.3093369052482 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle