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Protein Overview: srtx-1

General Information:
Name(s) found: srtx-1 / CE06717 [WormBase]
Description(s) found:
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  • WBGene00015214 locus:srtx-1 status:Confirmed UniProt:Q17519 protein_id:CCD62049.1 [WormBase]
  • pir||T29251 hypothetical protein B0496.5 - Caenorhabditis elegans [NCBI NR]
  • gi|17538286|ref|NP_501183.1| Serpentine Receptor, class TX family member (srtx-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|13324892|gb|AAK18876.1| Hypothetical protein B0496.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE06717 WBGene00015214 status:Partially_confirmed TR:Q17519 protein_id:AAK18876.1 [wormpep150.fasta]
  • 06717 WBGene00015214 status:Partially_confirmed TR:Q17519 protein_id:AAK18876.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein, with at least 6 transmembrane domains (4I187) [Caenorhabditis elegans]gi|13324892|gb|AAK18876.1| Hypothetical protein B0496.5 [Caenorhabditis elegans]gi|7494973|pir||T29251 hypothetical protein B0496.5 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q17519 protein_id:AAK18876.1 [wormpep115.fasta.reversed]
  • CE06717 status:Predicted TR:Q17519 protein_id:AAK18876.1 [wormpep80.hongbin]
  • CE06717 WBGene00015214 status:Partially_confirmed UniProt:Q17519_CAEEL protein_id:AAK18876.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06717 WBGene00015214 status:Partially_confirmed UniProt:Q17519_CAEEL protein_id:AAK18876.1| [wormORF-contam.fasta]
  • Hypothetical protein B0496.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • B0496.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE06717 WBGene00015214 locus:srtx-1 status:Partially_confirmed UniProt:Q17519 protein_id:AAK18876.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06717 WBGene00015214 locus:srtx-1 status:Partially_confirmed UniProt:Q17519_CAEEL protein_id:AAK18876.1 [wormbase_c-elegans_197_11-26-2008_reversed.fasta]
  • CE06717 WBGene00015214 locus:srtx-1 status:Confirmed UniProt:Q17519 protein_id:CCD62049.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE06717 WBGene00015214 locus:srtx-1 status:Confirmed UniProt:Q17519 protein_id:CCD62049.1 7TM GPCR, serpentine receptor class TX (Srtx) [wormpep246-ecoli-contam.fasta]
  • Serpentine Receptor, class TX OS=Caenorhabditis elegans GN=srtx-1 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: G-protein coupled receptor protein signaling pathway [IEALink to PubMed article]
    Molecular Function: rhodopsin-like receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEDLLYEVL PVIGFAIIAS SVLIIIVMRK ETKNSLIFCL CFAISDLLSG IGTLIDGFYG  60
   61 VIVTIYGNTV EAISPFDCLL RAINVPIFLI TDYLHVLLLA AFAIDRLIQI IFPVSYGKFY 120
  121 SYFINWKLFI LLIFASTGLS VQGWVFPLDS RFNSSVRVMS QCRFDEVVGE EYYLKHILTV 180
  181 QWSPIICVGI LFLNIVLYCI RQSKHKWSYN WSEEGKTTKQ LFATIFIRCF LSGLSVHVPL 240
  241 LVIARTTEGH ELIAIKDHII RVSYWIFVII FQPLWHFLIL SSFQSNVYSL FNRYSENTER 300
  301 KWQSANDPPE DGATHLDRHG SPNPFGSWYS MTGNITGEAG LPVGNERSVS FYYQE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..355] FFAS03 1.27 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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