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Protein Overview: lips-6

General Information:
Name(s) found: lips-6 / CE06636 [WormBase]
Description(s) found:
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  • WBGene00014009 locus:lips-6 status:Partially_confirmed UniProt:Q23548 protein_id:CAA98062.1 [WormBase]
  • pir||T27932 hypothetical protein ZK617.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3881729|emb|CAA98062.1| C. elegans protein ZK617.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17544624|ref|NP_502276.1| LIPaSe related family member (lips-6) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE06636 WBGene00014009 status:Partially_confirmed TR:Q23548 protein_id:CAA98062.1 [wormpep150.fasta]
  • 06636 WBGene00014009 status:Partially_confirmed TR:Q23548 protein_id:CAA98062.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • lipase, class 2 family member (4M780) [Caenorhabditis elegans]gi|3881729|emb|CAA98062.1| Hypothetical protein ZK617.2 [Caenorhabditis elegans]gi|7511245|pir||T27932 hypothetical protein ZK617.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q23548 protein_id:CAA98062.1 [wormpep115.fasta.reversed]
  • CE06636 status:Predicted TR:Q23548 protein_id:CAA98062.1 [wormpep80.hongbin]
  • CE06636 WBGene00014009 locus:lips-6 status:Partially_confirmed UniProt:Q23548_CAEEL protein_id:CAA98062.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06636 WBGene00014009 locus:lips-6 status:Partially_confirmed UniProt:Q23548_CAEEL protein_id:CAA98062.1| [wormORF-contam.fasta]
  • Hypothetical protein ZK617.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • ZK617.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06636 WBGene00014009 locus:lips-6 status:Partially_confirmed UniProt:Q23548 protein_id:CAA98062.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • LIPaSe related OS=Caenorhabditis elegans GN=lips-6 PE=4 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 344 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: lipid catabolic process [IEALink to PubMed article]
    Molecular Function: catalytic activity [IEALink to PubMed article]
    lipase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWITVAVML VAVGFAACGH AVDPHFMQWM QKNLKPEEVK AFVRDELTTG SFGGGVVTTE  60
   61 THDRPVVFVH GLNNEAGSLW KIARDFTNAN YPRQYLFATT WGKGTEPLNL NVAMSCTHVQ 120
  121 HVRRFIETVL KYTGAQKIDV IGYSMGSPIA RKAILGGKCV DNPNVALGPS LHSRVHTYIS 180
  181 VAGANQGSQL CALPFFDICN MKTGLMCNSK FLEDINWFKN YEGSYKAFNL ASTADFVVGY 240
  241 MACGKKASEF TGAHEWKVEG RNHEQTEFDT AAIQLQMLRE STAGLSKSRP SAKLEKKKNN 300
  301 SFSEVKKYLR SKRRDAPQKV KKTVTKKVKR TAVTSAHKKH VNKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..344] PSI-BLAST 37.0 Pseudomonas fluorescens aryl esterase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle