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Protein Overview: scpl-4

General Information:
Name(s) found: scpl-4 / CE06481 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00011897 locus:scpl-4 Mitochondrial import inner membrane translocase subunit TIM50 status:Partially_confirmed UniProt:Q22647 protein_id:CAA97339.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 452 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: phosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSKLTQTC FSRHQAKTFI RLYSSDFKSL LGPPAVANPY ADNGRTRFAP IVPINHGNVF  60
   61 ASIKLPINET QEAIAFKSEV EEAPKVEKLE VESPKIEAEK VLSSPPPAPA PTSSAIDELN 120
  121 SLKDSLEKLE SAASKSSSSS GGSSDNSDPG NAEEIEARRK RMERNTRIGA YVLFGGSIIG 180
  181 FISFCFYYGR AQRDEFGNVI SDEFSGSFLA PFYRIANSFK LWRDYVVEPA REQLLPDPLP 240
  241 APYLQPKYTI VIELKNILVH PEWTYKTGYR FLKRPALDYF LDVIGYPNFE VVIYSSESMM 300
  301 TAAPVVDSFD PKQRIMYKLF RDCTKYMNGH HVKDLSKLNR DLSKVIYIDF DAKSGQLNPE 360
  361 NMLRVPEWKG NMDDTSLVDL AELLKTIHLS DAEDVRPMLQ YYSQYDDPAK EFRRRAVYLS 420
  421 QQEEQKKQQP DDSSMLKRYS GRLFGSRRHV NA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] MSA 24.226997 View MSA. No confident structure predictions are available.
    2 View Details [205..452] PSI-BLAST 53.69897 Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  0.0218055309010409 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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