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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: scpl-4
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSKLTQTC FSRHQAKTFI RLYSSDFKSL LGPPAVANPY ADNGRTRFAP IVPINHGNVF  60
   61 ASIKLPINET QEAIAFKSEV EEAPKVEKLE VESPKIEAEK VLSSPPPAPA PTSSAIDELN 120
  121 SLKDSLEKLE SAASKSSSSS GGSSDNSDPG NAEEIEARRK RMERNTRIGA YVLFGGSIIG 180
  181 FISFCFYYGR AQRDEFGNVI SDEFSGSFLA PFYRIANSFK LWRDYVVEPA REQLLPDPLP 240
  241 APYLQPKYTI VIELKNILVH PEWTYKTGYR FLKRPALDYF LDVIGYPNFE VVIYSSESMM 300
  301 TAAPVVDSFD PKQRIMYKLF RDCTKYMNGH HVKDLSKLNR DLSKVIYIDF DAKSGQLNPE 360
  361 NMLRVPEWKG NMDDTSLVDL AELLKTIHLS DAEDVRPMLQ YYSQYDDPAK EFRRRAVYLS 420
  421 QQEEQKKQQP DDSSMLKRYS GRLFGSRRHV NA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle