| Protein: | scpl-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 452 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for scpl-4.
| Description | E-value | Query Range |
Subject Range |
|
|
305.0 | [0..24] | [443..34] |
|
Region A: Residues: [1-204] |
1 11 21 31 41 51
| | | | | |
1 MSLSKLTQTC FSRHQAKTFI RLYSSDFKSL LGPPAVANPY ADNGRTRFAP IVPINHGNVF 60
61 ASIKLPINET QEAIAFKSEV EEAPKVEKLE VESPKIEAEK VLSSPPPAPA PTSSAIDELN 120
121 SLKDSLEKLE SAASKSSSSS GGSSDNSDPG NAEEIEARRK RMERNTRIGA YVLFGGSIIG 180
181 FISFCFYYGR AQRDEFGNVI SDEF
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [205-452] |
1 11 21 31 41 51
| | | | | |
1 SGSFLAPFYR IANSFKLWRD YVVEPAREQL LPDPLPAPYL QPKYTIVIEL KNILVHPEWT 60
61 YKTGYRFLKR PALDYFLDVI GYPNFEVVIY SSESMMTAAP VVDSFDPKQR IMYKLFRDCT 120
121 KYMNGHHVKD LSKLNRDLSK VIYIDFDAKS GQLNPENMLR VPEWKGNMDD TSLVDLAELL 180
181 KTIHLSDAED VRPMLQYYSQ YDDPAKEFRR RAVYLSQQEE QKKQQPDDSS MLKRYSGRLF 240
241 GSRRHVNA
|
| Detection Method: | |
| Confidence: | 53.69897 |
| Match: | 1ta0A |
| Description: | Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| hydrolase activity | 0.0218055309010409 | bayes_pls_golite062009 |
