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Protein Overview: CE06460

General Information:
Name(s) found: CE06460 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00011834 locus:dvc-1 SprT-like domain-containing protein Spartan status:Confirmed UniProt:Q22557 protein_id:CAA98538.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IEALink to PubMed article]
    proteolysis [IEALink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    metallopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSSLVDPS FELSDPCPDI HALFIQFDAR FFGGSLACCE VKWSPRMYAC AGICSYEIRG  60
   61 GRGGLCSIRL SKPLLTLRPR SDLVETLLHE MIHAYLFVKE RNRDRDGHGP QFQAHMHRIN 120
  121 QAGGTNITIY HSFHDEVRLY KQHWWRCSGP CRDRRPFFGY VKRSCNRAPG PNDRWWSQHQ 180
  181 QSCGGNFLKV KEPEGYGQGK GSKRTNDKNK SGGPALKKTI TPPRVTLDDF FKKDGKNSSD 240
  241 NSTSKSPTKP STSLFTGSGQ KLGGSSSTSS LLNSYPKATQ NSGGNRLGGT SGGVSRLLPP 300
  301 VNFTSPSSAP VAEQVIDLGD SDDDDFQDMD DDALEISFVA SDNSVICPSC NTEVMENLIH 360
  361 GHLDYCLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] MSA 82.167996 View MSA. No confident structure predictions are available.
    2 View Details [183..249] deduced N/A No confident structure predictions are available.
    3 View Details [250..368] FFAS03 0.95 No description for 2cklB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle