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Protein Overview: rack-1

General Information:
Name(s) found: rack-1 / CE06090 [WormBase]
Description(s) found:
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  • WBGene00010556 locus:rack-1 Guanine nucleotide-binding protein subunit beta-2-like 1 status:Confirmed UniProt:Q21215 protein_id:CAA93514.1 [WormBase]
  • pir||T23309 hypothetical protein K04D7.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3878240|emb|CAA93514.1| C. elegans protein K04D7.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|2494907|sp|Q21215.3|GBLP_CAEEL RecName: Full=Guanine nucleotide-binding protein subunit beta-2-like 1 [NCBI NR]
  • gi|17541222|ref|NP_501859.1| RACK1 (mammalian Receptor of Activated C Kinase) homolog family member (rack-1) [Caenorhabditis elegans] [NCBI NR]
  • Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Caenorhabditis elegans GN=rack-1 PE=1 SV=3 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE06090 WBGene00010556 guanine nucleotide-binding protein status:Confirmed SW:Q21215 protein_id:CAA93514.1 [wormpep150.fasta]
  • 06090 WBGene00010556 guanine nucleotide-binding protein status:Confirmed SW:Q21215 protein_id:CAA93514.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • guanine nucleotide-binding protein -like (35.8 kD) (4K941) [Caenorhabditis elegans]gi|3878240|emb|CAA93514.1| Hypothetical protein K04D7.1 [Caenorhabditis elegans]gi|7505275|pir||T23309 hypothetical protein K04D7.1 - Caenorhabditis elegansgi|2494907|sp [nrdb_11152004_Chlamydomonas]
  • guanine nucleotide-binding protein status:Confirmed SW:Q21215 protein_id:CAA93514.1 [wormpep115.fasta.reversed]
  • CE06090 guanine nucleotide-binding protein status:Confirmed SW:Q21215 protein_id:CAA93514.1 [wormpep80.hongbin]
  • CE06090 WBGene00010556 locus:rack-1 guanine nucleotide-binding protein status:Confirmed UniProt:Q21215 protein_id:CAA93514.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06090 WBGene00010556 locus:rack-1 guanine nucleotide-binding protein status:Confirmed UniProt:Q21215 protein_id:CAA93514.1| [wormORF-contam.fasta]
  • CE06090 WBGene00010556 locus:rack-1 guanine nucleotide-binding protein status:Confirmed SW:Q21215 protein_id:CAA93514.1 [wormpep160-contam.fasta]
  • Hypothetical protein K04D7.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Guanine nucleotide-binding protein subunit beta 2-like 1 [nr-271106-contam.fasta]
  • RACK1 (mammalian Receptor of Activated C Kinase) homolog family member (rack-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06090 WBGene00010556 locus:rack-1 status:Confirmed UniProt:Q21215 protein_id:CAA93514.1 Guanine nucleotide-binding protein subunit beta-2-like 1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDA]
    centrosome [IDA]
    cytoplasm [IDA]
    kinetochore [IDA]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    positive regulation of locomotion [IMPLink to PubMed article]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQEQMKLTG TLEGHTGWVT QIATYTRNDK TTVLSSSRDK TILVWDVDSV APVDEGPIGR  60
   61 PVRSLTGHNH FVSDVVISSD GQFALSGSWD KTLRLWDLNQ GVSTRQFISH TKDVLSVAFS 120
  121 ADNRQIVSGS RDKSIKLWNT LAQCKYTITD DCHTDWVSTV RFSPSNRDPV IVSAGWDKVV 180
  181 KVWNLGNCRL KTNHIGHTGY VNTVTVSPDG SLCASGGKDG QAMLWDLNEG KHLYTLPGND 240
  241 VINAMSFSPN RYWLCAAVGS SIKIWDLEDK KEIEELKPEI ASSGSSRGSS PQCISLAWSQ 300
  301 DGQTLFAGYT DNIIRVYQVS IRASN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 65.045757 Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle