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Protein Overview: scl-1

General Information:
Name(s) found: scl-1 / CE05905 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004742 locus:scl-1 status:Confirmed UniProt:Q20608 protein_id:CAA94348.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: response to heat [IEPLink to PubMed article][IMPLink to PubMed article]
    determination of adult lifespan [IGILink to PubMed article]
    response to starvation [IEPLink to PubMed article]
    response to UV [IEPLink to PubMed article][IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFILCLLAI GVNAQFTSTG QSSIVDAHNK LRSAIAKSTY VAKGTKKEPA TDMRKMVVDS  60
   61 TVAASAQNYA NTCPTGHSKG TGYGENLYWS WTSADVGSLD SYGEIAAAAW EKEFQDFGWK 120
  121 SNAMDTTLFN SGIGHATQMA WANTSSIGCG VKNCGRDASM RNMNKIAVVC QYSPPGNTMG 180
  181 RPIYKEGTTC SSCSGSTKCD TASGLCG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] PSI-BLAST 39.221849 Novel X-Ray Structure of Na-ASP-2, a PR-1 protein from the nematode parasite Necator americanus and a vaccine antigen for human hookworm infection


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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