YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	scl-1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFILCLLAI GVNAQFTSTG QSSIVDAHNK LRSAIAKSTY VAKGTKKEPA TDMRKMVVDS  60
   61 TVAASAQNYA NTCPTGHSKG TGYGENLYWS WTSADVGSLD SYGEIAAAAW EKEFQDFGWK 120
  121 SNAMDTTLFN SGIGHATQMA WANTSSIGCG VKNCGRDASM RNMNKIAVVC QYSPPGNTMG 180
  181 RPIYKEGTTC SSCSGSTKCD TASGLCG

Type	Start	End	Confidence
Signal Peptide	1	14	0.98
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	207	0.98