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Protein Overview: CE05728

General Information:
Name(s) found: CE05728 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00009132 status:Confirmed UniProt:Q19788 protein_id:CAA93283.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: box H/ACA snoRNP complex [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: snoRNA binding [IEALink to PubMed article]
    pseudouridine synthase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEETIKVEN LDDSITIDRN PVPLAFCARP TLPAKIGMKT EDGIVDQLLD LVDPITVVNP  60
   61 TEIRQAPSLK SFGCDTESEF EFSGDDSDFE NINDLRAGAL DSDEEFDRLV KFSAKIIEKT 120
  121 HKSEYPDENG KKQRKPKKSQ KTRNVHEYDD MPPLENLSIE CKGQLLEFGF VSKVVDCQVV 180
  181 IISTCTEVLD FDSFLFDQKG NALGQIYDIF GQVKNPQYVI RFNSCEEASM IPIDMKVYYA 240
  241 PTEEQFSKTP FKGLNLAAAN RDAIKSLNRR IDHQEAVAKA GETMAQVGIG SDVEFSDDEA 300
  301 EKEFKRTTYT QPASQMSRGF DSNRGRKRDR RGGQKVRFSA QNPPARSDNL GPIPQQPSAP 360
  361 PPPARPAQST ESNPYAEFGC HSGFNGRFGI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.
    2 View Details [146..256] PSI-BLAST 24.045757 No description for 2v3mA was found.
    3 View Details [257..390] MSA 2.040987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle