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Protein Overview: srs-2

General Information:
Name(s) found: srs-2 / CE05445 [WormBase]
Description(s) found:
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  • WBGene00005663 locus:sars-1 Probable serine--tRNA ligase, cytoplasmic status:Confirmed UniProt:Q18678 protein_id:CAA93105.1 [WormBase]
  • pir||T20008 hypothetical protein C47E12.1 - Caenorhabditis elegans [NCBI NR]
  • gi|3875110|emb|CAA93105.1| C. elegans protein C47E12.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|2501055|sp|Q18678.1|SYSC_CAEEL RecName: Full=Probable seryl-tRNA synthetase, cytoplasmic; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS [NCBI NR]
  • gi|17539260|ref|NP_501804.1| Seryl tRNA Synthetase family member (srs-2) [Caenorhabditis elegans] [NCBI NR]
  • (Q18678) Probable seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS) [Swiss-Prot]
  • Probable serine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans GN=srs-2 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE05445 WBGene00005663 locus:srs-2 seryl-tRNA synthetase status:Confirmed SW:Q18678 protein_id:CAA93105.1 [wormpep150.fasta]
  • 05445 WBGene00005663 locus:srs-2 seryl-tRNA synthetase status:Confirmed SW:Q18678 protein_id:CAA93105.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • seryl tRNA Synthetase (55.2 kD) (srs-2) [Caenorhabditis elegans]gi|3875110|emb|CAA93105.1| Hypothetical protein C47E12.1 [Caenorhabditis elegans]gi|7497562|pir||T20008 hypothetical protein C47E12.1 - Caenorhabditis elegansgi|2501055|sp|Q18678|SYS_CAEEL [nrdb_11152004_Chlamydomonas]
  • locus:srs-2 seryl-tRNA synthetase status:Confirmed SW:Q18678 protein_id:CAA93105.1 [wormpep115.fasta.reversed]
  • CE05445 locus:srs-2 seryl-tRNA synthetase status:Confirmed SW:Q18678 protein_id:CAA93105.1 [wormpep80.hongbin]
  • CE05445 WBGene00005663 locus:srs-2 seryl-tRNA synthetase status:Confirmed UniProt:SYSC_CAEEL protein_id:CAA93105.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05445 WBGene00005663 locus:srs-2 seryl-tRNA synthetase status:Confirmed UniProt:SYSC_CAEEL protein_id:CAA93105.1| [wormORF-contam.fasta]
  • Seryl tRNA Synthetase family member (srs-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C47E12.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Probable seryl-tRNA synthetase (Serine--tRNA ligase) (SerRS) [nr-271106-contam.fasta]
  • CE05445 WBGene00005663 locus:srs-2 seryl-tRNA synthetase status:Confirmed UniProt:Q18678 protein_id:CAA93105.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05445 WBGene00005663 locus:sars-1 seryl-tRNA synthetase status:Confirmed UniProt:Q18678 protein_id:CAA93105.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE05445 WBGene00005663 locus:sars-1 status:Confirmed UniProt:Q18678 protein_id:CAA93105.1 Probable serine--tRNA ligase, cytoplasmic [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 487 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: tRNA aminoacylation for protein translation [IEALink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    translation [IEALink to PubMed article]
    seryl-tRNA aminoacylation [IEALink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    aminoacyl-tRNA ligase activity [IEALink to PubMed article]
    serine-tRNA ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLDIDMFRT EKGGNPEIIR KSQQDRFKDP KLVDEVIELD EKWRKERFVA DQLNRQKNAI  60
   61 SKAIGEKMKK KEPQGTDDSV ADDIVARLAE LKIDELSQLT VVQLKKLRVL VDEKSVQTAA 120
  121 AVIANENARH EKLIQIGNLI HSSVVVSKDE ANNKIERTFG DLSTKKKYSH VDLVVMVDGF 180
  181 DGERGTVVAG GRGYFLKGPL VFLEQAIIQL ALQRLNVKGY VPLYTPFFMR KEVMQEVAQL 240
  241 SQFDDELYKV SSKGSEIAGD TSVDEKYLIA TSEQPIAAYH RNEWIKETEL PIKYAGVSTC 300
  301 FRQEVGSHGR DTRGIFRVHQ FEKIEQFVLC SPNDNESWTL FDEMIGNAES YYQELQIPYQ 360
  361 VVNIVSGELN NAAAKKFDLE AWFPGSGAYR ELVSCSNCLD YQSRRLKVRY GQTKKLSGEV 420
  421 PFVHMLNATM CATTRVICAI LENNQTEEGI NVPTAIQQWM PENYRTFIPF VKPAPIDEDA 480
  481 KKATGKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..487] PSI-BLAST 93.69897 No description for 2dq0A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle