Protein Overview: cdc-48.2

General Information:
Name(s) found:	cdc-48.2 / CE05402 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00008053 locus:cdc-48.2 Transitional endoplasmic reticulum ATPase homolog 2 status:Confirmed UniProt:P54812 protein_id:CAA88105.1 [WormBase] pir\|\|T19879 hypothetical protein C41C4.8 - Caenorhabditis elegans [NCBI NR] gi\|6226902\|sp\|P54812.2\|TERA2_CAEEL RecName: Full=Transitional endoplasmic reticulum ATPase homolog 2; AltName: Full=Cell division cycle-related protein 48.2; AltName: Full=p97/CDC48 homolog 2 [NCBI NR] gi\|3875715\|emb\|CAA88314.1\| C. elegans protein C41C4.8, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|3874892\|emb\|CAA88105.1\| C. elegans protein C41C4.8, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|17532375\|ref\|NP_495705.1\| Cell Division Cycle related family member (cdc-48.2) [Caenorhabditis elegans] [NCBI NR] Transitional endoplasmic reticulum ATPase homolog 2 OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2 [Swiss-Prot] (P54812) Transitional endoplasmic reticulum ATPase homolog 2 (p97/CDC48 homolog 2) [Swiss-Prot] [wormpep67.fasta] CE05402 WBGene00008053 locus:cdc-48.2 P97 protein status:Partially_confirmed SW:P54812 protein_id:CAA88314.1 [wormpep150.fasta] 05402 WBGene00008053 P97 protein status:Partially_confirmed SW:P54812 protein_id:CAA88314.1 [wormpep130-phg-ecoli-orf-rand.fasta] transitional endoplasmic reticulum ATPase TER94 (89.6 kD) (2I431) [Caenorhabditis elegans]gi\|3875715\|emb\|CAA88314.1\| Hypothetical protein C41C4.8 [Caenorhabditis elegans]gi\|3874892\|emb\|CAA88105.1\| Hypothetical protein C41C4.8 [Caenorhabditis elegans]gi [nrdb_11152004_Chlamydomonas] CE05402 WBGene00008053 P97 protein status:Partially_confirmed SW:P54812 protein_id:CAA88314.1 [wormpep132.fasta] 05402 WBGene00008053 locus:cdc-48.2 P97 protein status:Partially_confirmed SW:P54812 protein_id:CAA88314.1 [wormpep150-phg-orf-ecoli-rand.fasta] P97 protein status:Partially_confirmed SW:P54812 protein_id:CAA88314.1 [wormpep115.fasta.reversed] CE05402 P97 protein status:Partially_confirmed SW:P54812 protein_id:CAA88314.1 [wormpep80.hongbin] CE05402 WBGene00008053 locus:cdc-48.2 P97 protein status:Confirmed UniProt:TERA2_CAEEL protein_id:CAA88314.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE05402 WBGene00008053 locus:cdc-48.2 P97 protein status:Confirmed UniProt:TERA2_CAEEL protein_id:CAA88314.1\| [wormORF-contam.fasta] Transitional endoplasmic reticulum ATPase homolog 2 (p97/CDC48 homolog 2) (Cell division cycle-related protein 48.2) [nr-271106-contam.fasta] Hypothetical protein C41C4.8 [Caenorhabditis elegans] [nr-271106-contam.fasta] Cell Division Cycle related family member (cdc-48.2) [Caenorhabditis elegans] [nr-271106-contam.fasta] CE05402 WBGene00008053 locus:cdc-48.2 P97 protein status:Confirmed SW:P54812 protein_id:CAA88314.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta] CE05402 WBGene00008053 locus:cdc-48.2 P97 protein status:Confirmed UniProt:P54812 protein_id:CAA88314.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE05402 WBGene00008053 locus:cdc-48.2 P97 protein status:Confirmed UniProt:P54812 protein_id:CAA88105.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] CE05402 WBGene00008053 locus:cdc-48.2 status:Confirmed UniProt:P54812 protein_id:CAA88105.1 Transitional endoplasmic reticulum ATPase homolog 2 [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	810 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] cytoplasm [IEA] membrane [IEA]
Biological Process:	DNA repair [IEA] locomotory behavior [IMP] nematode larval development [IMP] protein catabolic process [IEA] positive regulation of growth rate [IMP] embryonic development ending in birth or egg hatching [IMP] DNA recombination [IEA]
Molecular Function:	nucleotide binding [IEA] ATPase activity [IEA] ATP binding [IEA] DNA binding [IEA] nucleoside-triphosphatase activity [IEA] four-way junction helicase activity [IEA] metalloendopeptidase activity [IEA] hydrolase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVPTQRDE KEKKNDELAT AILKDKKRPN RLIIDQSDND DNSMVMLSQA KMDELGLFRG  60
   61 DSVILKGKKR RETVSIVLNA DNCPNDKIKM NKVVRNNLRS RLGDVVSISS AQLEYGKRVH 120
  121 VLPIDDTIEG LTGNLFDVFL RPYFTDAYRP VHKGDIFTVQ AAMRTVEFKV VETDPAPACI 180
  181 VAPDTVIHYE GDPIKREEEE EALNEVGYDD LGGVRKQLAQ IKEMVELPLR HPQLFKAIGV 240
  241 KPPRGILLFG PPGTGKTLIA RAVANETGAF FFLINGPEIM SKMSGESESN LRKAFAECEK 300
  301 NSPAILFIDE IDAIAPKREK AHGEVEKRIV SQLLTLMDGL KTRAHVVVIA ATNRPNSIDG 360
  361 ALRRFGRFDR EIDIGIPDAV GRLEILRIHT KNMKLGEDVD LEQVANECHG FVGADLASLC 420
  421 SEAAIQQIRE KMELIDLEDD TIDAEVLNSL AVTMENFRFA MGKSSPSALR EAVVETPNTT 480
  481 WSDIGGLQNV KRELQELVQY PVEHPEKYLK FGMQPSRGVL FYGPPGCGKT LLAKAIANEC 540
  541 QANFISIKGP ELLTMWFGES EANVRDVFDK ARAAAPCVLF FDELDSIAKA RGGSVGDAGG 600
  601 AADRVINQVL TEMDGMNAKK NVFIIGATNR PDIIDPAVLR PGRLDQLIYI PLPDEASRLQ 660
  661 IFKASLRKTP LSADLDLNFL AKNTVGFSGA DLTEICQRAC KLAIRESIER EIRQEKERQD 720
  721 RSARGEELME DELADPVPEI TRAHFEEAMK FARRSVTDND IRKYEMFAQT LQQSRGFGNN 780
  781 FKFPGEAPSA GQPVGGNGGS GGNDDDDLYN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	None Entered	No Comments	Cheeseman, I.M., et al. (2004)
View Run	hcp-1	hcp1 IP from december2004	Cheeseman, I.M., et al. (2005)
View Run	hcp-2	hcp2 ip from december	Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: cdc-48.2

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: