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Protein Overview: scl-8

General Information:
Name(s) found: scl-8 / CE05389 [WormBase]
Description(s) found:
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  • WBGene00008030 locus:scl-8 status:Partially_confirmed UniProt:Q18540 protein_id:CAA94332.1 [WormBase]
  • pir||T19849 hypothetical protein C39E9.6 - Caenorhabditis elegans [NCBI NR]
  • gi|3874841|emb|CAA94332.1| C. elegans protein C39E9.6, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17539084|ref|NP_502510.1| SCP-Like extracellular protein family member (scl-8) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE05389 WBGene00008030 testis-specific protein TPX-1 like status:Partially_confirmed TR:Q18540 protein_id:CAA94332.1 [wormpep150.fasta]
  • 05389 WBGene00008030 testis-specific protein TPX-1 like status:Partially_confirmed TR:Q18540 protein_id:CAA94332.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • allergen V5/Tpx-1 related precursor family member (4N837) [Caenorhabditis elegans]gi|3874841|emb|CAA94332.1| Hypothetical protein C39E9.6 [Caenorhabditis elegans]gi|7497224|pir||T19849 hypothetical protein C39E9.6 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • testis-specific protein TPX-1 like status:Partially_confirmed TR:Q18540 protein_id:CAA94332.1 [wormpep115.fasta.reversed]
  • CE05389 testis-specific protein TPX-1 like status:Predicted TR:Q18540 protein_id:CAA94332.1 [wormpep80.hongbin]
  • CE05389 WBGene00008030 locus:scl-8 testis-specific protein TPX-1 like status:Partially_confirmed UniProt:Q18540_CAEEL protein_id:CAA94332.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE05389 WBGene00008030 locus:scl-8 testis-specific protein TPX-1 like status:Partially_confirmed UniProt:Q18540_CAEEL protein_id:CAA94332.1| [wormORF-contam.fasta]
  • C39E9.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein C39E9.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE05389 WBGene00008030 locus:scl-8 testis-specific protein TPX-1 like status:Partially_confirmed UniProt:Q18540 protein_id:CAA94332.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE05389 WBGene00008030 locus:scl-8 status:Partially_confirmed UniProt:Q18540 protein_id:CAA94332.1 [wormpep246-ecoli-contam.fasta]
  • SCP-Like extracellular protein OS=Caenorhabditis elegans GN=scl-8 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 210 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: determination of adult lifespan [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLLVLAVA CVGVYAQFSE GGKQSILNAH NDIRSRIAKG NYVAKGNRKE SATNMLKMKW  60
   61 DSSLEQSAQN YANGCHMQHS TNDKTIGENL YWEWSGDPFS DLDKFGKIAT VAWDHEFEQF 120
  121 GWNSNKFSLA LFNTGVAHAT QIAWAPTGKI GCGVKNCGRD ARRGGLFQVA IVCQYRVRGN 180
  181 FFFKNIYNSG ATCSACPAGT SCEQSTGLCA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] PSI-BLAST 43.0 Novel X-Ray Structure of Na-ASP-2, a PR-1 protein from the nematode parasite Necator americanus and a vaccine antigen for human hookworm infection


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle