YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	scl-8
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTLLVLAVA CVGVYAQFSE GGKQSILNAH NDIRSRIAKG NYVAKGNRKE SATNMLKMKW  60
   61 DSSLEQSAQN YANGCHMQHS TNDKTIGENL YWEWSGDPFS DLDKFGKIAT VAWDHEFEQF 120
  121 GWNSNKFSLA LFNTGVAHAT QIAWAPTGKI GCGVKNCGRD ARRGGLFQVA IVCQYRVRGN 180
  181 FFFKNIYNSG ATCSACPAGT SCEQSTGLCA

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	210	0.99