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Protein Overview: CE05380

General Information:
Name(s) found: CE05380 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00007987 Major sperm protein status:Partially_confirmed UniProt:Q18503 protein_id:CAA93481.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: positive regulation of locomotion [IMPLink to PubMed article]
    Molecular Function: structural molecule activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETSSDKNC CETLEWIRER VHNKKHFTAR GIGQIVDVSG MDAELVVKVL AGALFAILAF  60
   61 SDQAHFFANA LLVAIPALLI FVFPIEKPTD ESLFVYFSLF GAVTCLDRSL EKIPCYYVIK 120
  121 LALFALLYLP PYVMHQKINE FIREQLKKQK SNENVSEMSQ RSAPRTAAST RTAISAPPPP 180
  181 RPPPQEPPKP VEQAAPPPPP APMPVPVEKA PEPVPAPVEQ IAPPPAPVQD PAPAPVEPSD 240
  241 PAPPSKLPSP SKSCTDLAGG SQRFKTGPHP MQSSSFHNLK SEFDGFNSAI SPGHNLNDVL 300
  301 FRPMDKIVFN APFDFENLTY HMRVSNNSRH RIAYAIKGNS VPRVMAYPAF GILELGEGRI 360
  361 IAVSVQKFDW NDFEYNKDRI AFDYVLLPDS NKEKAFSMSM FQHSDSKRRK NIKIEYNP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] MSA 3.117976 View MSA. No confident structure predictions are available.
    2 View Details [114..289] FFAS03 1.11 No description for 2grxC was found.
    3 View Details [290..418] PSI-BLAST 41.221849 Major sperm protein, MSP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.653234420802729 bayes_pls_golite062009
  • protein binding
    		•  0.170808849690486 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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