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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE05380
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETSSDKNC CETLEWIRER VHNKKHFTAR GIGQIVDVSG MDAELVVKVL AGALFAILAF  60
   61 SDQAHFFANA LLVAIPALLI FVFPIEKPTD ESLFVYFSLF GAVTCLDRSL EKIPCYYVIK 120
  121 LALFALLYLP PYVMHQKINE FIREQLKKQK SNENVSEMSQ RSAPRTAAST RTAISAPPPP 180
  181 RPPPQEPPKP VEQAAPPPPP APMPVPVEKA PEPVPAPVEQ IAPPPAPVQD PAPAPVEPSD 240
  241 PAPPSKLPSP SKSCTDLAGG SQRFKTGPHP MQSSSFHNLK SEFDGFNSAI SPGHNLNDVL 300
  301 FRPMDKIVFN APFDFENLTY HMRVSNNSRH RIAYAIKGNS VPRVMAYPAF GILELGEGRI 360
  361 IAVSVQKFDW NDFEYNKDRI AFDYVLLPDS NKEKAFSMSM FQHSDSKRRK NIKIEYNP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle